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INDEXED
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IGVFFI2040CSJU
IGVFFI2040CSJU
released
validated
Json view
File Set
IGVFDS4942IIYS
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI0560CIZS, IGVFFI7029DELQ, IGVFFI9942CBQB, IGVFFI2210BQAO
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp5_rna_10x1_NGS2
md5sum
5be3c6ed6dab0de8a1dc92cb3c2463a1
Content MD5sum
2b96a4146ea1b5ef7fcb998fe6f9336b
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp5_rna_10x1_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0560CIZS
fastq
reads
1
Read 2
Illumina NovaSeq X
223JJCLT3
6
13 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2210BQAO
fastq
reads
1
Read 1
Illumina NovaSeq X
223JJCLT3
6
5.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7029DELQ
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
6
2.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9942CBQB
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
6
1.4 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1143WWLK
MultiplexedSample
GM25256 (WTC-11)
,
H1-hESC
,
H9
,
HEK293T
multiplexed sample: H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; ... and 6 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford