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IGVFFI1977RNVF

released
validated
File Set
IGVFDS1843ABDU(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI7878OQMT, IGVFFI1800OYCP, IGVFFI7886ZYNI, IGVFFI2105BOXJ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp3_atac_10x3_NGS2
md5sum
b626c6c368ee5ceb8e228ea06111ce8e
Content MD5sum
bdd37e1aa0f1728f3484511fa7343a31
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp3_atac_10x3_NGS2_atac_seqspec.yaml.gz
Checkfiles Version
v16

seqspec File Of

4 items
Read Names
fastq
reads
1
Barcode index
222YV7LT3
2
5.7 GB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
222YV7LT3
2
2.4 GB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
Read 1
222YV7LT3
2
10 GB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
Read 2
222YV7LT3
2
10 GB
Ansuman Satpathy, Stanford
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford