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INDEXED
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ConfigurationFile
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IGVFFI1972MKVN
IGVFFI1972MKVN
released
validated
Json view
File Set
IGVFDS8107GLLI
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI0253CLUQ, IGVFFI7661UQGY, IGVFFI5949KIGS, IGVFFI6560GKUW
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp13_rna_10x3_NGS1
md5sum
9bb8cfb91fef23733bc58d5dd2fb3363
Content MD5sum
1e0bfdabc63b9b2b4432c834b93ee780
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp13_rna_10x3_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0253CLUQ
fastq
reads
1
Read 1
Illumina NovaSeq X
22HHHWLT3
1
6.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5949KIGS
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
1
1.7 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6560GKUW
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
1
2.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7661UQGY
fastq
reads
1
Read 2
Illumina NovaSeq X
22HHHWLT3
1
14 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1606SNOP
MultiplexedSample
left coronary artery
coronary artery disorder
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples