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INDEXED
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IGVFFI1964WNTJ
IGVFFI1964WNTJ
released
validated
Json view
File Set
IGVFDS0463BASV
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI1018OOCL, IGVFFI0054RGNX, IGVFFI3924LWOL
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI1018OOCL_seqspec
md5sum
7e617dbeef3b3b8f5ea8152cdd994db1
Content MD5sum
8ac158d7675421dfea9b2d38fe8b30ee
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI1018OOCL_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0054RGNX
fastq
reads
3
Read 2
Illumina NovaSeq 6000
11 GB
Jason Buenrostro, Broad
validated
IGVFFI1018OOCL
fastq
reads
3
Read 1
Illumina NovaSeq 6000
11 GB
Jason Buenrostro, Broad
validated
IGVFFI3924LWOL
fastq
reads
3
Barcode index
Illumina NovaSeq 6000
3.5 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4720VFLQ
PrimaryCell
colon
Mus musculus C57BL/6J colon cell