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INDEXED
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ConfigurationFile
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IGVFFI1882PRIW
IGVFFI1882PRIW
released
validated
Json view
File Set
IGVFDS9742DJVE
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI5013NBDP, IGVFFI7798IXDZ
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8273_seqspec
md5sum
56f934b9c0f2e98fec370bdb9583f597
Content MD5sum
67b19be21bfbee6163f9786bf9f09a47
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8273_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI5013NBDP
fastq
reads
8273
Read 1
Illumina NovaSeq X
22TMH5LT3
2.5 GB
Jason Buenrostro, Broad
validated
IGVFFI7798IXDZ
fastq
reads
8273
Read 2, Barcode index
Illumina NovaSeq X
22TMH5LT3
3.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6095NJDT
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 528)