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INDEXED
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ConfigurationFile
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IGVFFI1823EKNQ
IGVFFI1823EKNQ
released
validated
Json view
File Set
IGVFDS9733ZKEL
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2500UITZ, IGVFFI4857JWQD, IGVFFI3450GEML
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4358_seqspec
md5sum
1e4dbe0e3b86aa0e59ce032c9f21d124
Content MD5sum
395084320801c9741abf4a4de8c13767
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI2500UITZ_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2500UITZ
fastq
reads
4358
Read 1
Illumina NovaSeq 6000
H75F7DSX5
3.4 GB
Jason Buenrostro, Broad
validated
IGVFFI3450GEML
fastq
reads
4358
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
1.2 GB
Jason Buenrostro, Broad
validated
IGVFFI4857JWQD
fastq
reads
4358
Read 2
Illumina NovaSeq 6000
H75F7DSX5
1.5 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5050LUEZ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 172)