{
"@context": "/terms/",
"@id": "/configuration-files/IGVFFI1697JSJE/",
"@type": [
"ConfigurationFile",
"File",
"Item"
],
"accession": "IGVFFI1697JSJE",
"aliases": [
"leif-ludwig:measurement2312527008_scATAC_L003_seqspec"
],
"assay_titles": [
"10x multiome with scMito-seq"
],
"audit": {},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping"
},
"checkfiles_version": "v20",
"content_md5sum": "f3c01863a2531ccc68c6a6fc89377952",
"content_type": "seqspec",
"creation_timestamp": "2025-03-19T16:12:32.090044+00:00",
"file_format": "yaml",
"file_set": {
"@id": "/measurement-sets/IGVFDS6156CSUO/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS6156CSUO",
"assay_term": {
"@id": "/assay-terms/OBI_0002764/",
"term_name": "single-cell ATAC-seq"
},
"controlled_access": true,
"data_use_limitation_summaries": [
"GRU-PUB"
],
"file_set_type": "experimental data",
"samples": [
{
"@id": "/primary-cells/IGVFSM7994IWYP/",
"@type": [
"PrimaryCell",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM7994IWYP",
"classifications": [
"primary cell"
],
"sample_terms": [
{
"@id": "/sample-terms/CL_2000001/",
"status": "released",
"term_name": "peripheral blood mononuclear cell"
}
],
"status": "preview",
"summary": "Homo sapiens (male, 69 years) peripheral blood mononuclear cell",
"taxa": "Homo sapiens"
}
],
"status": "preview",
"summary": "10x multiome with scMito-seq"
},
"file_size": 1492,
"gene_list_for": [],
"href": "/configuration-files/IGVFFI1697JSJE/@@download/IGVFFI1697JSJE.yaml.gz",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/leif-ludwig/",
"title": "Leif Ludwig, MDC"
},
"loci_list_for": [],
"md5sum": "72f49289867cf70ed7484cc30413a061",
"quality_metrics": [],
"s3_uri": "s3://igvf-files/2025/03/19/0be7d849-42ac-4cd3-bf65-65cd2f052517/IGVFFI1697JSJE.yaml.gz",
"schema_version": "7",
"seqspec_of": [
"/sequence-files/IGVFFI1610XDEE/",
"/sequence-files/IGVFFI1167EEXR/",
"/sequence-files/IGVFFI8163TVJZ/"
],
"status": "preview",
"submitted_by": {
"@id": "/users/8164e524-79d5-4407-8a75-c0ea353d28ea/",
"title": "Ludwig Lab"
},
"submitted_file_name": "/Users/fermel/work/IGVF/seqspecs_samples_6-15/measurement2312527008_scATAC_L003.spec.yaml.gz",
"summary": "seqspec of IGVFFI1610XDEE, IGVFFI1167EEXR, IGVFFI8163TVJZ",
"upload_status": "validated",
"uuid": "0be7d849-42ac-4cd3-bf65-65cd2f052517",
"validate_onlist_files": true
}