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INDEXED
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IGVFFI1394HOFP
IGVFFI1394HOFP
released
validated
Json view
File Set
IGVFDS0668NWBP
(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI8771VDIL, IGVFFI8000SURV, IGVFFI7517VBXP, IGVFFI4622LUDJ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp11_atac_10x2_NGS3
md5sum
46161d52896c14b8273d0c9c67e7c755
Content MD5sum
08824efd448b2f8d05658a02b3ddc05f
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp11_atac_10x2_NGS3_atac_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4622LUDJ
fastq
reads
1
Read 2
Illumina NovaSeq X
2257FHLT3
7
10 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7517VBXP
fastq
reads
1
Barcode index
Illumina NovaSeq X
2257FHLT3
7
5.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8000SURV
fastq
reads
1
Illumina NovaSeq X
2257FHLT3
7
2.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8771VDIL
fastq
reads
1
Read 1
Illumina NovaSeq X
2257FHLT3
7
10 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9487HFQW
MultiplexedSample
GM25256 (WTC-11)
,
H7-hESC
multiplexed sample: H7-hESC differentiated cell specimen, female, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days, male, Homo sapiens; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford