Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI1383HRAM
IGVFFI1383HRAM
released
validated
Json view
File Set
IGVFDS3634TPOY
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI0144XKWL, IGVFFI5154ZGBU, IGVFFI1470VEAL, IGVFFI5684CHCL
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp9_rna_10x1_NGS1
md5sum
b411c17d645cada82831dc8d43b85b92
Content MD5sum
544ca7ccd946ff0b3c15c6fcb0bd2f1f
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp9_rna_10x1_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0144XKWL
fastq
reads
1
Read 1
Illumina NovaSeq X
223JHYLT3
1
7.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1470VEAL
fastq
reads
1
Illumina NovaSeq X
223JHYLT3
1
1.7 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5154ZGBU
fastq
reads
1
Read 2
Illumina NovaSeq X
223JHYLT3
1
16 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5684CHCL
fastq
reads
1
Illumina NovaSeq X
223JHYLT3
1
1.9 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9678IFHW
MultiplexedSample
B cell
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 1 day; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 5 days; ... and 5 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford