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INDEXED
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ConfigurationFile
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IGVFFI1332WZRQ
IGVFFI1332WZRQ
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI7510AQCA, IGVFFI7241APOI
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7339_seqspec
md5sum
a7bd298bed7c33f9ab24c506ebde5da5
Content MD5sum
99700a2f414e264b6b92c210a76fd953
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7339_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI7241APOI
fastq
reads
7339
Read 2, Barcode index
Illumina NovaSeq 6000
22KFF5LT3
13 GB
Jason Buenrostro, Broad
validated
IGVFFI7510AQCA
fastq
reads
7339
Read 1
Illumina NovaSeq 6000
22KFF5LT3
8.9 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)