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INDEXED
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ConfigurationFile
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IGVFFI1272FOKW
IGVFFI1272FOKW
released
validated
Json view
File Set
IGVFDS3343IRTP
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI5749SZIW, IGVFFI3977QLNX, IGVFFI0549DSZA
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8920_seqspec
md5sum
ab8d1a68e441df3a9badfa0cd7513bea
Content MD5sum
7a69eb1c05288da134fd766fe608ccaf
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI5749SZIW_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0549DSZA
fastq
reads
8920
Barcode index
Illumina NovaSeq X
22LMVNLT4
1.2 MB
Jason Buenrostro, Broad
validated
IGVFFI3977QLNX
fastq
reads
8920
Read 2
Illumina NovaSeq X
22LMVNLT4
1.9 MB
Jason Buenrostro, Broad
validated
IGVFFI5749SZIW
fastq
reads
8920
Read 1
Illumina NovaSeq X
22LMVNLT4
2.0 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3115GZZM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 171)