IGVFFI1221VSPC

{
    "@context": "/terms/",
    "@id": "/configuration-files/IGVFFI1221VSPC/",
    "@type": [
        "ConfigurationFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI1221VSPC",
    "aliases": [
        "jay-shendure:seqspec_of_set_IGVFDS0935XBYS-1"
    ],
    "assay_titles": [
        "scATAC-seq"
    ],
    "audit": {},
    "award": {
        "@id": "/awards/HG011966/",
        "component": "functional characterization"
    },
    "content_md5sum": "1c3914f50b105d289127fa071379813a",
    "content_type": "seqspec",
    "creation_timestamp": "2024-05-09T23:23:28.898514+00:00",
    "file_format": "yaml",
    "file_set": {
        "@id": "/measurement-sets/IGVFDS0935XBYS/",
        "accession": "IGVFDS0935XBYS",
        "file_set_type": "experimental data",
        "samples": [
            {
                "@id": "/in-vitro-systems/IGVFSM4284RDJK/",
                "accession": "IGVFSM4284RDJK",
                "classifications": [
                    "differentiated cell specimen"
                ],
                "sample_terms": [
                    {
                        "@id": "/sample-terms/EFO_0004038/",
                        "term_name": "mouse embryonic stem cell"
                    }
                ],
                "summary": "mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10XlaneB), male, Mus musculus WD44",
                "taxa": "Mus musculus"
            }
        ],
        "summary": "scATAC-seq"
    },
    "file_size": 850,
    "gene_list_for": [],
    "href": "/configuration-files/IGVFFI1221VSPC/@@download/IGVFFI1221VSPC.yaml.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jay-shendure/",
        "title": "Jay Shendure, UW"
    },
    "loci_list_for": [],
    "md5sum": "8f5ea67cdf90c2bb56ba83fb627b9075",
    "release_timestamp": "2024-07-09T20:16:42.832565+00:00",
    "s3_uri": "s3://igvf-files/2024/05/09/6e7aa54c-30d4-445f-801c-3dc71b7a857c/IGVFFI1221VSPC.yaml.gz",
    "schema_version": "7",
    "seqspec_of": [
        "/sequence-files/IGVFFI0542XAEU/",
        "/sequence-files/IGVFFI4898DJEK/",
        "/sequence-files/IGVFFI9019LDKO/",
        "/sequence-files/IGVFFI0226IFPA/"
    ],
    "status": "released",
    "submitted_by": {
        "@id": "/users/73f58e9f-8f5d-4fee-a7cd-dd63c0167e4b/",
        "title": "Beth Martin"
    },
    "submitted_file_name": "/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/10XATAC-IGVFDS0935XBYS-1.yaml.gz",
    "summary": "seqspec of IGVFFI0542XAEU, IGVFFI4898DJEK, IGVFFI9019LDKO, IGVFFI0226IFPA",
    "upload_status": "validated",
    "uuid": "6e7aa54c-30d4-445f-801c-3dc71b7a857c"
}