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ConfigurationFile
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IGVFFI1198XDCG
IGVFFI1198XDCG
released
validated
Json view
File Set
IGVFDS6011QOLR
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI6000MWMD, IGVFFI3057DWVU, IGVFFI3199YUKD
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4090_seqspec
md5sum
64da7695a5369208852c86b6db4963f8
Content MD5sum
5b7b82bf19cd27b69697dcd953892662
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI6000MWMD_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3057DWVU
fastq
reads
4090
Read 2
Illumina NovaSeq X
22523KLT3
565 MB
Jason Buenrostro, Broad
validated
IGVFFI3199YUKD
fastq
reads
4090
Barcode index
Illumina NovaSeq X
22523KLT3
494 MB
Jason Buenrostro, Broad
validated
IGVFFI6000MWMD
fastq
reads
4090
Read 1
Illumina NovaSeq X
22523KLT3
1.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1772WCQE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 206)