IGVFFI1061ZHCJ

preview
validated
1{
2    "@context": "/terms/",
3    "@id": "/configuration-files/IGVFFI1061ZHCJ/",
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6        "File",
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9    "accession": "IGVFFI1061ZHCJ",
10    "aliases": [
11        "leif-ludwig:measurement2306820102_scATAC_L004_seqspec"
12    ],
13    "assay_titles": [
14        "10x multiome with scMito-seq"
15    ],
16    "audit": {},
17    "award": {
18        "@id": "/awards/HG012076/",
19        "component": "mapping"
20    },
21    "checkfiles_version": "v20",
22    "content_md5sum": "8f981f3821ce4cf16cb8be5ab2d502aa",
23    "content_type": "seqspec",
24    "creation_timestamp": "2025-03-19T16:11:40.516646+00:00",
25    "file_format": "yaml",
26    "file_set": {
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31            "Item"
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33        "accession": "IGVFDS8004HLTL",
34        "assay_term": {
35            "@id": "/assay-terms/OBI_0002764/",
36            "term_name": "single-cell ATAC-seq"
37        },
38        "file_set_type": "experimental data",
39        "samples": [
40            {
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42                "@type": [
43                    "PrimaryCell",
44                    "Biosample",
45                    "Sample",
46                    "Item"
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48                "accession": "IGVFSM1838ENPX",
49                "classifications": [
50                    "primary cell"
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52                "sample_terms": [
53                    {
54                        "@id": "/sample-terms/CL_2000001/",
55                        "status": "released",
56                        "term_name": "peripheral blood mononuclear cell"
57                    }
58                ],
59                "status": "preview",
60                "summary": "Homo sapiens (male, 26 years) peripheral blood mononuclear cell",
61                "taxa": "Homo sapiens"
62            }
63        ],
64        "status": "preview",
65        "summary": "10x multiome with scMito-seq"
66    },
67    "file_size": 1494,
68    "gene_list_for": [],
69    "href": "/configuration-files/IGVFFI1061ZHCJ/@@download/IGVFFI1061ZHCJ.yaml.gz",
70    "input_file_for": [],
71    "integrated_in": [],
72    "lab": {
73        "@id": "/labs/leif-ludwig/",
74        "title": "Leif Ludwig, MDC"
75    },
76    "loci_list_for": [],
77    "md5sum": "6071bd86e9a9d6313db3076960d42594",
78    "quality_metrics": [],
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80    "schema_version": "7",
81    "seqspec_of": [
82        "/sequence-files/IGVFFI4747XMLB/",
83        "/sequence-files/IGVFFI0040SGZL/",
84        "/sequence-files/IGVFFI4490AMBV/"
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87    "submitted_by": {
88        "@id": "/users/8164e524-79d5-4407-8a75-c0ea353d28ea/",
89        "title": "Ludwig Lab"
90    },
91    "submitted_file_name": "/Users/fermel/work/IGVF/seqspecs_samples_6-15/measurement2306820102_scATAC_L004.spec.yaml.gz",
92    "summary": "seqspec of IGVFFI4747XMLB, IGVFFI0040SGZL, IGVFFI4490AMBV",
93    "upload_status": "validated",
94    "uuid": "da634856-203a-4786-895e-6a47105a6068",
95    "validate_onlist_files": true
96}