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IGVFFI0899KKAC

released
validated
File Set
IGVFDS2220HHTN(gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI8008YPNQ, IGVFFI7842UOGS, IGVFFI0849UBQW, IGVFFI4732FLWG
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane2_seqlane1_CS1_seqspec
md5sum
649eac20d85767fee556ab87b575fe60
Content MD5sum
b29bc689f96a287e2906cafcd3b48ac1
File Size
1.5 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS2220HHTN_1_CS1_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

4 items
Read Names
fastq
reads
1
Read 1
AAAMCTVHV
1
1.1 GB
Jay Shendure, UW
validated
fastq
reads
1
Read 2
AAAMCTVHV
1
1.3 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
1
347 MB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
1
323 MB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane2) modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library