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IGVFFI0896MCPD

released
validated
File Set
IGVFDS5192VPKQ(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI4562ZCKO, IGVFFI1478VZJX
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_2009_seqspec
md5sum
1daeb8a73daeb7b55894f11d4ec76b01
Content MD5sum
68cfc684ce59125dacfb7b87461ce435
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2009_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
247
Read 2, Barcode index
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
247
Read 1
564 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
367 MB
validated
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
2.2 GB
validated