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IGVFFI0889TRBH
IGVFFI0889TRBH
released
validated
Json view
File Set
IGVFDS2170OFES
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI7988NRLI, IGVFFI7267ZCIN, IGVFFI1155PHAS, IGVFFI9913PXIH
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp17_rna_10x3_NGS3
md5sum
bb5b46f008d8ab92529cefd53dc08b63
Content MD5sum
b9b4a7df656d39d8ae7b0d14d7d19c51
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp17_rna_10x3_NGS3_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1155PHAS
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
7
1.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7267ZCIN
fastq
reads
1
Read 2
Illumina NovaSeq X
22NCYLLT3
7
11 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7988NRLI
fastq
reads
1
Read 1
Illumina NovaSeq X
22NCYLLT3
7
5.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9913PXIH
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
7
1.5 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6345RLEH
MultiplexedSample
RUES2
multiplexed sample: RUES2 differentiated cell specimen induced to gastrula for 2 days, female, Homo sapiens; RUES2 differentiated cell specimen induced to gastrula for 1 day, female, Homo sapiens; ... and 10 more samples
Attribution
Award
HG011972
Principal Investigator(s)
Anshul Kundaje
,
Jesse Engreitz
,
Marlene Rabinovitch
,
Lars Steinmetz
,
Michael Bassik
,
Thomas Quertermous
,
Will Greenleaf
Contact P.I.
Jesse Engreitz
Lab
Ansuman Satpathy, Stanford