Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI0729NMNK
IGVFFI0729NMNK
released
validated
Json view
File Set
IGVFDS0681XTSI
(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI4871SJVU, IGVFFI9388SWWE, IGVFFI2964YQOF, IGVFFI6246OWQV
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp13_atac_10x3_NGS3
md5sum
180784b37443515c6c85bab9e86e3eac
Content MD5sum
c4257765c28d8947ab12dd2fb4813e50
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp13_atac_10x3_NGS3_atac_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2964YQOF
fastq
reads
1
Read 1
Illumina NovaSeq X
22JL3GLT3
3
9.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4871SJVU
fastq
reads
1
Read 2
Illumina NovaSeq X
22JL3GLT3
3
9.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6246OWQV
fastq
reads
1
Illumina NovaSeq X
22JL3GLT3
3
2.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9388SWWE
fastq
reads
1
Barcode index
Illumina NovaSeq X
22JL3GLT3
3
5.1 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1606SNOP
MultiplexedSample
left coronary artery
coronary artery disorder
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples