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INDEXED
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ConfigurationFile
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IGVFFI0714JZHN
IGVFFI0714JZHN
released
validated
Json view
File Set
IGVFDS0506MOGA
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI7933GDFA, IGVFFI4781THSS, IGVFFI6491GFUH
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_1034_seqspec
md5sum
ba8053cef269fab192d65feb11f3069a
Content MD5sum
db515b735719071b879c983fe5683775
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI7933GDFA_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4781THSS
fastq
reads
1034
Read 2
Illumina NovaSeq X
22773CLT3
566 MB
Jason Buenrostro, Broad
validated
IGVFFI6491GFUH
fastq
reads
1034
Barcode index
Illumina NovaSeq X
22773CLT3
505 MB
Jason Buenrostro, Broad
validated
IGVFFI7933GDFA
fastq
reads
1034
Read 1
Illumina NovaSeq X
22773CLT3
1.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1023FJHJ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 188)