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INDEXED
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ConfigurationFile
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IGVFFI0712FCFI
IGVFFI0712FCFI
released
validated
Json view
File Set
IGVFDS6411MOAB
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI4406UZER, IGVFFI4046HSZL, IGVFFI1626CQOO, IGVFFI8077HAFP
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp11_rna_10x1_NGS1
md5sum
8ec8a1236fc7e3717ed92db317321c9e
Content MD5sum
d5b405367ff5a60b24eec1a3d7428b32
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp11_rna_10x1_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1626CQOO
fastq
reads
1
Illumina NovaSeq X
HGVFMDSX7
3
3.7 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4046HSZL
fastq
reads
1
Illumina NovaSeq X
HGVFMDSX7
3
4.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4406UZER
fastq
reads
1
Read 2
Illumina NovaSeq X
HGVFMDSX7
3
33 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8077HAFP
fastq
reads
1
Read 1
Illumina NovaSeq X
HGVFMDSX7
3
37 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9367PJMT
MultiplexedSample
GM25256 (WTC-11)
,
H7-hESC
multiplexed sample: Homo sapiens (female) H7-hESC differentiated cell specimen; Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days; ... and 10 more samples