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INDEXED
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IGVFFI0603MXUI
IGVFFI0603MXUI
released
validated
Json view
File Set
IGVFDS6310VXMX
(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI6420ORAF, IGVFFI0428TBOI, IGVFFI2077YAUW, IGVFFI2655RSJT
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp6_atac_10x2_NGS3
md5sum
f504b95d0e6f047b29d69c2b28c79cbd
Content MD5sum
4f9bac180c1adf31b257868b02d2766c
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp6_atac_10x2_NGS3_atac_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0428TBOI
fastq
reads
1
Read 2
Illumina NovaSeq X
223JH2LT3
7
8.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2077YAUW
fastq
reads
1
Read 1
Illumina NovaSeq X
223JH2LT3
7
8.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2655RSJT
fastq
reads
1
Barcode index
Illumina NovaSeq X
223JH2LT3
7
4.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6420ORAF
fastq
reads
1
Illumina NovaSeq X
223JH2LT3
7
1.9 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8961ZZQN
MultiplexedSample
H1-hESC
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford