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INDEXED
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ConfigurationFile
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IGVFFI0456AGBL
IGVFFI0456AGBL
released
validated
Json view
File Set
IGVFDS9931JAJO
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI3897TQJB, IGVFFI0471SKPU
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8320_seqspec
md5sum
d49b92fd91a90f300d6075460b8db80c
Content MD5sum
d92382e9d7dbed58a0edbb3cc9706b6a
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8320_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0471SKPU
fastq
reads
8320
Read 2, Barcode index
Illumina NovaSeq X
22TMH5LT3
1.8 GB
Jason Buenrostro, Broad
validated
IGVFFI3897TQJB
fastq
reads
8320
Read 1
Illumina NovaSeq X
22TMH5LT3
1.3 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1865KZPO
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 584)