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INDEXED
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IGVFFI0449PVAM
IGVFFI0449PVAM
released
validated
Json view
File Set
IGVFDS5786SCIX
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI5260WOIC, IGVFFI5800DHVI, IGVFFI9342HTEM, IGVFFI8840MDYG
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp11_rna_10x2_NGS2
md5sum
a54e0a9a14ef7468bbe9587142113f67
Content MD5sum
b29b078a40ec0c574b561ba2daa48f9f
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp11_rna_10x2_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI5260WOIC
fastq
reads
1
Read 1
Illumina NovaSeq X
HGVFMDSX7
4
36 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5800DHVI
fastq
reads
1
Read 2
Illumina NovaSeq X
HGVFMDSX7
4
31 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8840MDYG
fastq
reads
1
Illumina NovaSeq X
HGVFMDSX7
4
3.9 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9342HTEM
fastq
reads
1
Illumina NovaSeq X
HGVFMDSX7
4
3.2 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9487HFQW
MultiplexedSample
GM25256 (WTC-11)
,
H7-hESC
multiplexed sample: H7-hESC differentiated cell specimen, female, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days, male, Homo sapiens; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford