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IGVFFI0432LITC

released
validated
File Set
IGVFDS7938OXSK(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI1620FHAB, IGVFFI9110GXHY
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7380_seqspec
md5sum
f38a2cf234637ca275a84b4f7456360f
Content MD5sum
3cbad4e40175f788e306a496e7ca371d
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7380_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
7380
Read 1
22KFF5LT3
8.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
7380
Read 2, Barcode index
22KFF5LT3
14 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
976 MB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
5.5 GB
validated