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INDEXED
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ConfigurationFile
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IGVFFI0331EHQR
IGVFFI0331EHQR
released
validated
Json view
File Set
IGVFDS9364TNAM
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI1625RYZQ, IGVFFI7512KRYI, IGVFFI0602TOGB
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI1625RYZQ_seqspec
md5sum
fc1e71c15388979097464f900493e848
Content MD5sum
a4284a2bd6fb4c95b190edc2134066a8
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI1625RYZQ_seqspec.yaml.gz
Checkfiles Version
v20
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0602TOGB
fastq
reads
2
Barcode index
Illumina NovaSeq 6000
1.8 GB
Jason Buenrostro, Broad
validated
IGVFFI1625RYZQ
fastq
reads
2
Read 1
Illumina NovaSeq 6000
3.4 GB
Jason Buenrostro, Broad
validated
IGVFFI7512KRYI
fastq
reads
2
Read 2
Illumina NovaSeq 6000
3.5 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0354RWOF
PrimaryCell
colon
Mus musculus C57BL/6J colon cell
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad