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INDEXED
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ConfigurationFile
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IGVFFI0249CZUS
IGVFFI0249CZUS
released
validated
Json view
File Set
IGVFDS5960BAQO
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4401BUJA, IGVFFI5234JFYS, IGVFFI3412XJGO
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI5234JFYS_seqspec
md5sum
fbe3a942c49c6bdf88a6371c7b6e54e4
Content MD5sum
110cdbf87cc9a636dbc6c854896ff564
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI5234JFYS_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3412XJGO
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
1.7 GB
Jason Buenrostro, Broad
validated
IGVFFI4401BUJA
fastq
reads
1
Read 1
Illumina NovaSeq 6000
3.2 GB
Jason Buenrostro, Broad
validated
IGVFFI5234JFYS
fastq
reads
1
Read 2
Illumina NovaSeq 6000
3.3 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0332KRWE
PrimaryCell
colon
Mus musculus C57BL/6J colon cell