Home

IGVFFI0182TGVL

released
validated
File Set
IGVFDS8248GGOY(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI2845PDJF, IGVFFI3616NUWL
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_2071_seqspec
md5sum
499fcc9ece8d89b88296b75d3a7d7bc8
Content MD5sum
032429d80eb7abb5a91792a554cf3d7f
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2071_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
256
Read 1
538 MB
Jason Buenrostro, Broad
validated
fastq
reads
256
Read 2, Barcode index
791 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)

Files Derived From This File

2 items
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
2.2 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
924 MB
validated