Home

IGVFDS0713EITK

released
File Set Type
cell sorting
Summary
cell sorting for CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
Aliases
jesse-engreitz:auxiliary_sortparams_CRUDO_FAM3C_Auxin0hrs-FF2

Tabular Files

1 item
Accession
File Format
Content Type
Lab
File Size
Upload Status
tsv
sample sort parameters
Jesse Engreitz, Stanford
491 B
validated

Samples

6 items
Sample Terms
Summary
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin C for 35-45% expression of FAM3C) modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin E for 80-90% expression of FAM3C) modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin A for 0-10% expression of FAM3C) modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin B for 10-20% expression of FAM3C) modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin F for 80-100% expression of FAM3C) modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin D for 55-65% expression of FAM3C) modified with a guide library

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_HCT116
male
Homo sapiens

Related Measurement Sets

6 items
MeasurementSet
CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinA-PCR1-Rep1_S121
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinA-PCR2-Rep1_S127
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinA-PCR3-Rep1_S175
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinA-PCR4-Rep1_S181
Jesse Engreitz, Stanford
MeasurementSet
CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinF-PCR1-Rep1_S126
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinF-PCR2-Rep1_S132
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinF-PCR3-Rep1_S180
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinF-PCR4-Rep1_S186
Jesse Engreitz, Stanford
MeasurementSet
CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinB-PCR1-Rep1_S122
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinB-PCR2-Rep1_S128
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinB-PCR3-Rep1_S176
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinB-PCR4-Rep1_S182
Jesse Engreitz, Stanford
MeasurementSet
CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinE-PCR1-Rep1_S125
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinE-PCR2-Rep1_S131
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinE-PCR3-Rep1_S179
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinE-PCR4-Rep1_S185
Jesse Engreitz, Stanford
MeasurementSet
CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinC-PCR1-Rep1_S123
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinC-PCR2-Rep1_S129
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinC-PCR3-Rep1_S177
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinC-PCR4-Rep1_S183
Jesse Engreitz, Stanford
MeasurementSet
CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinD-PCR1-Rep1_S124
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinD-PCR2-Rep1_S130
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinD-PCR3-Rep1_S178
  • jesse-engreitz:measurement_CRUDO_FAM3C_Auxin0hrs-FF2-BinD-PCR4-Rep1_S184
Jesse Engreitz, Stanford

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford