{
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{
"category": "missing file format specifications",
"detail": "Tabular file [IGVFFI5342EBSX](/tabular-files/IGVFFI5342EBSX/) has no `file_format_specifications`. Tabular files are expected to link to a file format specifications document describing the headers of the file.",
"level": 50,
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}
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},
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},
{
"@id": "/measurement-sets/IGVFDS8728GREK/",
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{
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],
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},
{
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}
],
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{
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"Item"
],
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],
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}
],
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},
{
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"Item"
],
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{
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],
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}
],
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},
{
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"Biosample",
"Sample",
"Item"
],
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"jesse-engreitz:in-vitro-system_CRUDO_FAM3C_Auxin0hrs-FF2-BinC-PCR3-Rep1_S177",
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{
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}
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{
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"Item"
],
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],
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"summary": "HCT116",
"term_name": "HCT116"
}
],
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"taxa": "Homo sapiens"
},
{
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"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
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"jesse-engreitz:in-vitro-system_CRUDO_FAM3C_Auxin0hrs-FF2-BinD-PCR3-Rep1_S178",
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{
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}
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{
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],
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],
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}
],
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"taxa": "Homo sapiens"
},
{
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"Biosample",
"Sample",
"Item"
],
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"jesse-engreitz:in-vitro-system_CRUDO_FAM3C_Auxin0hrs-FF2-BinE-PCR3-Rep1_S179",
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],
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{
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}
],
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{
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"Item"
],
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],
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"term_name": "HCT116"
}
],
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"taxa": "Homo sapiens"
},
{
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"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
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"jesse-engreitz:in-vitro-system_CRUDO_FAM3C_Auxin0hrs-FF2-BinF-PCR3-Rep1_S180",
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{
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"modality": "interference"
},
{
"@id": "/degron-modifications/2e8d10cc-fc98-44d5-a7d9-e2892e16c98a/",
"modality": "degradation"
}
],
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{
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"@type": [
"SampleTerm",
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"Item"
],
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"igvf:HCT116"
],
"status": "released",
"summary": "HCT116",
"term_name": "HCT116"
}
],
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"summary": "HCT116 cell line, male, Homo sapiens (sorting details: FACS bin F for 80-100% expression of FAM3C) modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library",
"taxa": "Homo sapiens"
}
],
"schema_version": "11",
"status": "released",
"submitted_by": {
"@id": "/users/100f06c6-83a7-4b4d-9dfd-053a1829773b/",
"title": "Benjamin Doughty"
},
"submitted_files_timestamp": "2024-07-03T00:35:28.413781+00:00",
"summary": "cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets",
"uuid": "b3966413-c9f4-46c1-a80d-66d522b1844b"
}