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Gersbach GGR ATAC-seq Pipeline Signal Generation Step
Gersbach GGR ATAC-seq Pipeline Signal Generation Step
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Title
Gersbach GGR ATAC-seq Pipeline Signal Generation Step
Description
DESeq2 analysis described and hosted in https://github.com/Gersbachlab-Bioinformatics/mccutcheon-et-al-2023.
Step Label
gersbach-ggr-atac-seq-pipeline-signal-step
Analysis Step Types
signal generation
Workflow
IGVFWF6411VZLF
Input Content Types
peak quantifications
Output Content Types
fold change over control
Analysis Step Versions
1 item
Analysis Step Versions
Software Versions
/analysis-step-versions/0fab42c4-4f3c-468e-a051-3f1e7606fba6/
deseq2-v1.36.0
Attribution
Award
HG012053
Principal Investigator(s)
Charles Gersbach
,
Gregory Crawford
,
Tim Reddy
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke