{
"@context": "/terms/",
"@id": "/analysis-sets/IGVFDS9490WNXZ/",
"@type": [
"AnalysisSet",
"FileSet",
"Item"
],
"accession": "IGVFDS9490WNXZ",
"aliases": [
"charles-gersbach:analysis-set-bulk-atac-DEanalysis"
],
"assay_titles": [
"ATAC-seq"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM5361EAGX](/in-vitro-systems/IGVFSM5361EAGX/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM5361EAGX/"
},
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM9739CNEQ](/in-vitro-systems/IGVFSM9739CNEQ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM9739CNEQ/"
},
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM4983MYZQ](/in-vitro-systems/IGVFSM4983MYZQ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM4983MYZQ/"
},
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM7187NNQU](/in-vitro-systems/IGVFSM7187NNQU/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM7187NNQU/"
},
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM9172PRNN](/in-vitro-systems/IGVFSM9172PRNN/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM9172PRNN/"
},
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM6698FQIG](/in-vitro-systems/IGVFSM6698FQIG/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM6698FQIG/"
},
{
"category": "missing publication",
"detail": "Analysis set [IGVFDS9490WNXZ](/analysis-sets/IGVFDS9490WNXZ/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/analysis-sets/IGVFDS9490WNXZ/"
}
]
},
"award": {
"@id": "/awards/HG012053/",
"component": "functional characterization",
"contact_pi": {
"@id": "/users/5d329c0e-3ea9-49bf-9bb9-844a53a882c0/",
"title": "Charles Gersbach"
},
"title": "High-Throughput Functional Annotation of Gene Regulatory Elements and Variants Critical to Complex Cellular Phenotypes"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2024-10-28T16:57:16.521272+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO1756PPKO/",
"accession": "IGVFDO1756PPKO",
"aliases": [
"igvf:donor_of_WTC11"
],
"sex": "male",
"status": "released",
"taxa": "Homo sapiens"
}
],
"file_set_type": "principal analysis",
"files": [
{
"@id": "/tabular-files/IGVFFI9763CJKG/",
"accession": "IGVFFI9763CJKG",
"aliases": [
"charles-gersbach:tabular-file-bulk-atac-count"
],
"assembly": "GRCh38",
"content_type": "peak quantifications",
"controlled_access": false,
"creation_timestamp": "2024-10-28T17:07:10.116373+00:00",
"derived_from": [
"/alignment-files/IGVFFI1534IVYM/",
"/alignment-files/IGVFFI2179LWNB/",
"/alignment-files/IGVFFI4382XXOK/",
"/alignment-files/IGVFFI2631HESV/",
"/alignment-files/IGVFFI3796FCTL/",
"/alignment-files/IGVFFI4523VJXB/"
],
"file_format": "tsv",
"file_size": 4343150,
"href": "/tabular-files/IGVFFI9763CJKG/@@download/IGVFFI9763CJKG.tsv.gz",
"md5sum": "91559b17fd4b62d16d58f46b3a20b101",
"s3_uri": "s3://igvf-files/2024/10/28/108a447b-66f7-44c4-90ce-9b7c94ec39a5/IGVFFI9763CJKG.tsv.gz",
"status": "released",
"submitted_file_name": "/hpc/group/gersbachlab/tda17/IGVF_data_files/ATAC/atacseq_counts.tsv.gz",
"upload_status": "validated"
},
{
"@id": "/tabular-files/IGVFFI7417ASXN/",
"accession": "IGVFFI7417ASXN",
"aliases": [
"charles-gersbach:tabular-file-bulk-atac-DEanalysis"
],
"assembly": "GRCh38",
"content_type": "fold change over control",
"controlled_access": false,
"creation_timestamp": "2024-10-28T17:07:12.513293+00:00",
"derived_from": [
"/tabular-files/IGVFFI9763CJKG/"
],
"file_format": "csv",
"file_size": 4865252,
"href": "/tabular-files/IGVFFI7417ASXN/@@download/IGVFFI7417ASXN.csv.gz",
"md5sum": "0cf3ea297c9b871ea52fbcde5bdf48c9",
"s3_uri": "s3://igvf-files/2024/10/28/13412717-b523-4c1c-b3d5-85b92c93f2b1/IGVFFI7417ASXN.csv.gz",
"status": "released",
"submitted_file_name": "/hpc/group/gersbachlab/tda17/IGVF_data_files/ATAC/atac_DE_analysis.csv.gz",
"upload_status": "validated"
},
{
"@id": "/alignment-files/IGVFFI4523VJXB/",
"accession": "IGVFFI4523VJXB",
"aliases": [
"charles-gersbach:alignment-set-bulk-atac-control-ipsc-cm-rep3"
],
"assembly": "GRCh38",
"content_type": "alignments",
"controlled_access": false,
"creation_timestamp": "2024-10-28T18:07:02.244934+00:00",
"derived_from": [
"/sequence-files/IGVFFI0171YSVN/",
"/sequence-files/IGVFFI4951YDJU/"
],
"file_format": "bam",
"file_size": 5021501819,
"href": "/alignment-files/IGVFFI4523VJXB/@@download/IGVFFI4523VJXB.bam",
"md5sum": "1b01038ae953703155b7f98017916f51",
"s3_uri": "s3://igvf-files/2024/10/28/3977e02e-0652-4989-9e17-b6d16d44c244/IGVFFI4523VJXB.bam",
"status": "released",
"submitted_file_name": "/datacommons/gersbachlab/Ruhi/IGVFdatasubmission/TaylorHiCAR/ATAC/Control_3.masked.dups_marked.bam",
"upload_status": "validated"
},
{
"@id": "/alignment-files/IGVFFI1534IVYM/",
"accession": "IGVFFI1534IVYM",
"aliases": [
"charles-gersbach:alignment-set-bulk-atac-chir4um-ipsc-cm-rep1"
],
"assembly": "GRCh38",
"content_type": "alignments",
"controlled_access": false,
"creation_timestamp": "2024-10-28T18:06:53.879353+00:00",
"derived_from": [
"/sequence-files/IGVFFI7981LTYW/",
"/sequence-files/IGVFFI7428JVFJ/"
],
"file_format": "bam",
"file_size": 3281902607,
"href": "/alignment-files/IGVFFI1534IVYM/@@download/IGVFFI1534IVYM.bam",
"md5sum": "f7b14208d1fdb6f9dfed0c9b87ae64f1",
"s3_uri": "s3://igvf-files/2024/10/28/f7416fe0-e2e8-4aa5-8a3e-074f6aa047a3/IGVFFI1534IVYM.bam",
"status": "released",
"submitted_file_name": "/datacommons/gersbachlab/Ruhi/IGVFdatasubmission/TaylorHiCAR/ATAC/CHRIR4uM_1.masked.dups_marked.bam",
"upload_status": "validated"
},
{
"@id": "/alignment-files/IGVFFI3796FCTL/",
"accession": "IGVFFI3796FCTL",
"aliases": [
"charles-gersbach:alignment-set-bulk-atac-control-ipsc-cm-rep2"
],
"assembly": "GRCh38",
"content_type": "alignments",
"controlled_access": false,
"creation_timestamp": "2024-10-28T18:07:01.035821+00:00",
"derived_from": [
"/sequence-files/IGVFFI2839CBYW/",
"/sequence-files/IGVFFI7818LEWI/"
],
"file_format": "bam",
"file_size": 1255714208,
"href": "/alignment-files/IGVFFI3796FCTL/@@download/IGVFFI3796FCTL.bam",
"md5sum": "0bf93179b975c9dad92af1fc5f9cd442",
"s3_uri": "s3://igvf-files/2024/10/28/759b02c6-d37f-415c-8ad5-b0702973003e/IGVFFI3796FCTL.bam",
"status": "released",
"submitted_file_name": "/datacommons/gersbachlab/Ruhi/IGVFdatasubmission/TaylorHiCAR/ATAC/Control_2.masked.dups_marked.bam",
"upload_status": "validated"
},
{
"@id": "/alignment-files/IGVFFI2179LWNB/",
"accession": "IGVFFI2179LWNB",
"aliases": [
"charles-gersbach:alignment-set-bulk-atac-chir4um-ipsc-cm-rep2"
],
"assembly": "GRCh38",
"content_type": "alignments",
"controlled_access": false,
"creation_timestamp": "2024-10-28T18:06:55.740965+00:00",
"derived_from": [
"/sequence-files/IGVFFI2586YJYO/",
"/sequence-files/IGVFFI4776AHGG/"
],
"file_format": "bam",
"file_size": 3049682143,
"href": "/alignment-files/IGVFFI2179LWNB/@@download/IGVFFI2179LWNB.bam",
"md5sum": "2081cc526d3d8481ae50b3b057c6086b",
"s3_uri": "s3://igvf-files/2024/10/28/a805e9a7-1c56-4696-8ecf-6788aaa01742/IGVFFI2179LWNB.bam",
"status": "released",
"submitted_file_name": "/datacommons/gersbachlab/Ruhi/IGVFdatasubmission/TaylorHiCAR/ATAC/CHRIR4uM_2.masked.dups_marked.bam",
"upload_status": "validated"
},
{
"@id": "/alignment-files/IGVFFI4382XXOK/",
"accession": "IGVFFI4382XXOK",
"aliases": [
"charles-gersbach:alignment-set-bulk-atac-chir4um-ipsc-cm-rep3"
],
"assembly": "GRCh38",
"content_type": "alignments",
"controlled_access": false,
"creation_timestamp": "2024-10-28T18:06:58.502654+00:00",
"derived_from": [
"/sequence-files/IGVFFI7136JOHD/",
"/sequence-files/IGVFFI2232JXAS/"
],
"file_format": "bam",
"file_size": 3489575580,
"href": "/alignment-files/IGVFFI4382XXOK/@@download/IGVFFI4382XXOK.bam",
"md5sum": "1d796844a98948a88384603983372c25",
"s3_uri": "s3://igvf-files/2024/10/28/59c506f6-998c-4922-ac8f-3a6c2ce3a5a1/IGVFFI4382XXOK.bam",
"status": "released",
"submitted_file_name": "/datacommons/gersbachlab/Ruhi/IGVFdatasubmission/TaylorHiCAR/ATAC/CHRIR4uM_3.masked.dups_marked.bam",
"upload_status": "validated"
},
{
"@id": "/alignment-files/IGVFFI2631HESV/",
"accession": "IGVFFI2631HESV",
"aliases": [
"charles-gersbach:alignment-set-bulk-atac-control-ipsc-cm-rep1"
],
"assembly": "GRCh38",
"content_type": "alignments",
"controlled_access": false,
"creation_timestamp": "2024-10-28T18:06:59.747225+00:00",
"derived_from": [
"/sequence-files/IGVFFI9646HDEO/",
"/sequence-files/IGVFFI5115MUFD/"
],
"file_format": "bam",
"file_size": 1935905372,
"href": "/alignment-files/IGVFFI2631HESV/@@download/IGVFFI2631HESV.bam",
"md5sum": "18cfa9a697f14a3bf79a9a7abaf78114",
"s3_uri": "s3://igvf-files/2024/10/28/4aab682a-91c9-4555-8e19-f7e514aea185/IGVFFI2631HESV.bam",
"status": "released",
"submitted_file_name": "/datacommons/gersbachlab/Ruhi/IGVFdatasubmission/TaylorHiCAR/ATAC/Control_1.masked.dups_marked.bam",
"upload_status": "validated"
}
],
"functional_assay_mechanisms": [],
"input_file_sets": [
{
"@id": "/measurement-sets/IGVFDS5576TGNS/",
"accession": "IGVFDS5576TGNS",
"aliases": [
"charles-gersbach:measurement-set-bulk-atac-chir4um-ipsc-cm-rep1"
],
"file_set_type": "experimental data",
"status": "released"
},
{
"@id": "/measurement-sets/IGVFDS9961QTUB/",
"accession": "IGVFDS9961QTUB",
"aliases": [
"charles-gersbach:measurement-set-bulk-atac-chir4um-ipsc-cm-rep2"
],
"file_set_type": "experimental data",
"status": "released"
},
{
"@id": "/measurement-sets/IGVFDS8881TVYW/",
"accession": "IGVFDS8881TVYW",
"aliases": [
"charles-gersbach:measurement-set-bulk-atac-chir4um-ipsc-cm-rep3"
],
"file_set_type": "experimental data",
"status": "released"
},
{
"@id": "/measurement-sets/IGVFDS3147NUPL/",
"accession": "IGVFDS3147NUPL",
"aliases": [
"charles-gersbach:measurement-set-bulk-atac-control-ipsc-cm-rep1"
],
"file_set_type": "experimental data",
"status": "released"
},
{
"@id": "/measurement-sets/IGVFDS7875RFFR/",
"accession": "IGVFDS7875RFFR",
"aliases": [
"charles-gersbach:measurement-set-bulk-atac-control-ipsc-cm-rep2"
],
"file_set_type": "experimental data",
"status": "released"
},
{
"@id": "/measurement-sets/IGVFDS7128QRSY/",
"accession": "IGVFDS7128QRSY",
"aliases": [
"charles-gersbach:measurement-set-bulk-atac-control-ipsc-cm-rep3"
],
"file_set_type": "experimental data",
"status": "released"
}
],
"input_for": [],
"lab": {
"@id": "/labs/charles-gersbach/",
"title": "Charles Gersbach, Duke"
},
"protocols": [
"https://www.protocols.io/view/atac-seq-for-human-ipsc-cm-following-gsk3-inhibiti-5qpvokj27l4o"
],
"release_timestamp": "2024-12-03T20:43:49.891873+00:00",
"sample_summary": "Homo sapiens GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell, at 28 day(s) post change, antagonized with 4 μM GSK3 inhibition for 7 days",
"samples": [
{
"@id": "/in-vitro-systems/IGVFSM6698FQIG/",
"@type": [
"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM6698FQIG",
"aliases": [
"charles-gersbach:in-vitro-system-bulk-atac-chir4um-ipsc-cm-rep1"
],
"classifications": [
"differentiated cell specimen"
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/a62cea9b-2ae0-44e8-a6d6-81f419c56c71/",
"certificate_identifier": "IP117-03",
"controlled_access": false,
"status": "released"
}
],
"sample_terms": [
{
"@id": "/sample-terms/EFO_0009747/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"aliases": [
"igvf:WTC11"
],
"status": "released",
"summary": "GM25256 (WTC-11)",
"term_name": "GM25256 (WTC-11)"
}
],
"status": "released",
"summary": "Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days treated with 4 μM GSK3 inhibition for 7 days",
"targeted_sample_term": {
"@id": "/sample-terms/CL_0000746/",
"status": "released",
"term_name": "cardiac muscle cell"
},
"taxa": "Homo sapiens",
"treatments": [
{
"@id": "/treatments/98ba0c5c-8005-41bc-bcbb-6c6eff41af4e/",
"purpose": "antagonist",
"status": "released",
"summary": "Treatment of 4 μM GSK3 inhibition for 7 days",
"treatment_term_name": "GSK3 inhibition",
"treatment_type": "chemical"
}
]
},
{
"@id": "/in-vitro-systems/IGVFSM5361EAGX/",
"@type": [
"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM5361EAGX",
"aliases": [
"charles-gersbach:in-vitro-system-bulk-atac-chir4um-ipsc-cm-rep3"
],
"classifications": [
"differentiated cell specimen"
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/a62cea9b-2ae0-44e8-a6d6-81f419c56c71/",
"certificate_identifier": "IP117-03",
"controlled_access": false,
"status": "released"
}
],
"sample_terms": [
{
"@id": "/sample-terms/EFO_0009747/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"aliases": [
"igvf:WTC11"
],
"status": "released",
"summary": "GM25256 (WTC-11)",
"term_name": "GM25256 (WTC-11)"
}
],
"status": "released",
"summary": "Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days treated with 4 μM GSK3 inhibition for 7 days",
"targeted_sample_term": {
"@id": "/sample-terms/CL_0000746/",
"status": "released",
"term_name": "cardiac muscle cell"
},
"taxa": "Homo sapiens",
"treatments": [
{
"@id": "/treatments/98ba0c5c-8005-41bc-bcbb-6c6eff41af4e/",
"purpose": "antagonist",
"status": "released",
"summary": "Treatment of 4 μM GSK3 inhibition for 7 days",
"treatment_term_name": "GSK3 inhibition",
"treatment_type": "chemical"
}
]
},
{
"@id": "/in-vitro-systems/IGVFSM9172PRNN/",
"@type": [
"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM9172PRNN",
"aliases": [
"charles-gersbach:in-vitro-system-bulk-atac-chir4um-ipsc-cm-rep2"
],
"classifications": [
"differentiated cell specimen"
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/a62cea9b-2ae0-44e8-a6d6-81f419c56c71/",
"certificate_identifier": "IP117-03",
"controlled_access": false,
"status": "released"
}
],
"sample_terms": [
{
"@id": "/sample-terms/EFO_0009747/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"aliases": [
"igvf:WTC11"
],
"status": "released",
"summary": "GM25256 (WTC-11)",
"term_name": "GM25256 (WTC-11)"
}
],
"status": "released",
"summary": "Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days treated with 4 μM GSK3 inhibition for 7 days",
"targeted_sample_term": {
"@id": "/sample-terms/CL_0000746/",
"status": "released",
"term_name": "cardiac muscle cell"
},
"taxa": "Homo sapiens",
"treatments": [
{
"@id": "/treatments/98ba0c5c-8005-41bc-bcbb-6c6eff41af4e/",
"purpose": "antagonist",
"status": "released",
"summary": "Treatment of 4 μM GSK3 inhibition for 7 days",
"treatment_term_name": "GSK3 inhibition",
"treatment_type": "chemical"
}
]
},
{
"@id": "/in-vitro-systems/IGVFSM7187NNQU/",
"@type": [
"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM7187NNQU",
"aliases": [
"charles-gersbach:in-vitro-system-bulk-atac-control-ipsc-cm-rep2"
],
"classifications": [
"differentiated cell specimen"
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/a62cea9b-2ae0-44e8-a6d6-81f419c56c71/",
"certificate_identifier": "IP117-03",
"controlled_access": false,
"status": "released"
}
],
"sample_terms": [
{
"@id": "/sample-terms/EFO_0009747/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"aliases": [
"igvf:WTC11"
],
"status": "released",
"summary": "GM25256 (WTC-11)",
"term_name": "GM25256 (WTC-11)"
}
],
"status": "released",
"summary": "Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days",
"targeted_sample_term": {
"@id": "/sample-terms/CL_0000746/",
"status": "released",
"term_name": "cardiac muscle cell"
},
"taxa": "Homo sapiens"
},
{
"@id": "/in-vitro-systems/IGVFSM4983MYZQ/",
"@type": [
"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM4983MYZQ",
"aliases": [
"charles-gersbach:in-vitro-system-bulk-atac-control-ipsc-cm-rep3"
],
"classifications": [
"differentiated cell specimen"
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/a62cea9b-2ae0-44e8-a6d6-81f419c56c71/",
"certificate_identifier": "IP117-03",
"controlled_access": false,
"status": "released"
}
],
"sample_terms": [
{
"@id": "/sample-terms/EFO_0009747/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"aliases": [
"igvf:WTC11"
],
"status": "released",
"summary": "GM25256 (WTC-11)",
"term_name": "GM25256 (WTC-11)"
}
],
"status": "released",
"summary": "Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days",
"targeted_sample_term": {
"@id": "/sample-terms/CL_0000746/",
"status": "released",
"term_name": "cardiac muscle cell"
},
"taxa": "Homo sapiens"
},
{
"@id": "/in-vitro-systems/IGVFSM9739CNEQ/",
"@type": [
"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM9739CNEQ",
"aliases": [
"charles-gersbach:in-vitro-system-bulk-atac-control-ipsc-cm-rep1"
],
"classifications": [
"differentiated cell specimen"
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/a62cea9b-2ae0-44e8-a6d6-81f419c56c71/",
"certificate_identifier": "IP117-03",
"controlled_access": false,
"status": "released"
}
],
"sample_terms": [
{
"@id": "/sample-terms/EFO_0009747/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"aliases": [
"igvf:WTC11"
],
"status": "released",
"summary": "GM25256 (WTC-11)",
"term_name": "GM25256 (WTC-11)"
}
],
"status": "released",
"summary": "Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days",
"targeted_sample_term": {
"@id": "/sample-terms/CL_0000746/",
"status": "released",
"term_name": "cardiac muscle cell"
},
"taxa": "Homo sapiens"
}
],
"schema_version": "9",
"status": "released",
"submitted_by": {
"@id": "/users/3782ce69-0e9f-4b46-91f9-4578139785c7/",
"title": "Ruhi Rai"
},
"submitted_files_timestamp": "2024-10-28T17:07:10.116373+00:00",
"summary": "ATAC-seq: alignments, fold change over control, peak quantifications",
"uuid": "5567d409-55b3-4f42-a791-f3bde6377e51",
"workflows": [
{
"@id": "/workflows/IGVFWF6411VZLF/",
"accession": "IGVFWF6411VZLF",
"name": "Gersbach GGR ATAC-seq Pipeline",
"status": "released"
}
]
}