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IGVFDS7714RCSY

released
Aliases
charles-gersbach:cd8-tcells-intermediate-set-atac-seq-acute-activation-gfp
File Set Type
intermediate analysis
Summary
ATAC-seq: alignments
Publications
Samples
CD8-positive, alpha-beta memory T cell primary cell, transfected with a expression vector library
Protocols

Files

3 items
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
1.7 GB
validated
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
2.2 GB
validated
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
1.1 GB
validated

File Association Graph

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File Set
File
AnalysisSet
MeasurementSet

Samples

3 items
Sample Terms
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

Donors

3 items
Aliases
  • charles-gersbach:cd8-tcells-donor-10
unspecified
Homo sapiens
  • charles-gersbach:cd8-tcells-donor-11
unspecified
Homo sapiens
  • charles-gersbach:cd8-tcells-donor-9
unspecified
Homo sapiens

MeasurementSet Input File Sets

3 items
Associated Construct Library Sets
ATAC-seq integrating a control transduction expression vector library
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
ATAC-seq integrating a control transduction expression vector library
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
ATAC-seq integrating a control transduction expression vector library
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

File Sets Using This Analysis Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
ATAC-seq: fold change over control, peak quantifications
  • charles-gersbach:cd8-tcells-analysis-set-atac-seq-acute-activation-batf3
Charles Gersbach, Duke

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke