{
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],
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],
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],
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{
"category": "missing demultiplexed sample",
"detail": "Analysis set [IGVFDS6443DIXD](/analysis-sets/IGVFDS6443DIXD/) has `input_file_sets` with multiplexed samples: [IGVFSM5574TAPU](/multiplexed-samples/IGVFSM5574TAPU/) but no `demultiplexed_samples`. Analysis sets with multiplexed samples are expected to specify a demultiplexed sample.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_analysis_set_multiplexed_samples",
"path": "/analysis-sets/IGVFDS6443DIXD/"
},
{
"category": "missing publication",
"detail": "Analysis set [IGVFDS6443DIXD](/analysis-sets/IGVFDS6443DIXD/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/analysis-sets/IGVFDS6443DIXD/"
},
{
"category": "missing publication",
"detail": "Multiplexed sample [IGVFSM5574TAPU](/multiplexed-samples/IGVFSM5574TAPU/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/multiplexed-samples/IGVFSM5574TAPU/"
}
]
},
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},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
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],
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],
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},
{
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],
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"taxa": "Homo sapiens"
},
{
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],
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"status": "released",
"taxa": "Homo sapiens"
}
],
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},
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},
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},
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},
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],
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"controlled_access": true,
"creation_timestamp": "2025-01-28T15:28:57.412649+00:00",
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}
],
"functional_assay_mechanisms": [],
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{
"@id": "/measurement-sets/IGVFDS1581RZTR/",
"accession": "IGVFDS1581RZTR",
"aliases": [
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],
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},
{
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],
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},
{
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],
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}
],
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"lab": {
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"title": "Ansuman Satpathy, Stanford"
},
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],
"release_timestamp": "2025-03-22T00:43:39.215818+00:00",
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{
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"@type": [
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"Item"
],
"accession": "IGVFSM5574TAPU",
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],
"classifications": [
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],
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{
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}
],
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{
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"@type": [
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"Item"
],
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},
{
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"@type": [
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"OntologyTerm",
"Item"
],
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"summary": "bone marrow",
"term_name": "bone marrow"
}
],
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"summary": "multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
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"title": "Khine Lin"
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"summary": "single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)",
"uuid": "4985efd1-a6b9-467e-bff4-2d67c1a93340",
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}
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}