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IGVFDS5278IBSB

released
Aliases
buenrostro-bernstein:human-bone-marrow-analysis-set
File Set Type
principal analysis
Summary
SHARE-seq: fragments, sparse gene count matrix
Samples
bone marrow primary cell
Protocols

Files

2 items
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated

File Association Graph

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Samples

49 items
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), female, Homo sapiens (19 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (26 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (49 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), female, Homo sapiens (19 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (49 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (26 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (29 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (37 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (26 years)

Donors

7 items
Aliases
  • bradley-bernstein:Donor 1992
  • buenrostro-bernstein:Donor 1992
unspecified
Homo sapiens
  • bradley-bernstein:Donor 1510
  • buenrostro-bernstein:Donor 1510
male
Homo sapiens
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens
  • bradley-bernstein:Donor 1508
  • buenrostro-bernstein:Donor 1508
female
Homo sapiens
  • bradley-bernstein:Donor 1507
  • buenrostro-bernstein:Donor 1507
male
Homo sapiens
  • bradley-bernstein:Donor 1511
  • buenrostro-bernstein:Donor 1511
male
Homo sapiens
  • bradley-bernstein:Donor 1506
  • buenrostro-bernstein:Donor 1506
male
Homo sapiens

MeasurementSet Input File Sets

98 items
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (26 years)
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (49 years)
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (37 years)
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (29 years)
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (26 years)
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 7), female, Homo sapiens (19 years)
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (26 years)
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (29 years)
single-cell ATAC-seq (SHARE-seq)
bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (29 years)

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad