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IGVFDS5153IDEO

released
Aliases
buenrostro-bernstein:surya-mouse-colitis-tissue-analysis-set
File Set Type
intermediate analysis
Summary
SHARE-seq: fragments, sparse gene count matrix
Workflows
Samples
Mus musculus colon tissue
Protocols
Attribution
Jason Buenrostro, Broad

Files

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
10 MB
validated
tsv
fragments
fragments
Jason Buenrostro, Broad
4.0 GB
validated

File Association Graph

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File Set
File
AnalysisSet
MeasurementSet

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus C57BL/6J colon tissue

Donors

5 items
Aliases
  • buenrostro-bernstein:surya-APC01-B1-6B
unspecified
Mus musculus
  • buenrostro-bernstein:surya-APC01-B1-4B
unspecified
Mus musculus
  • buenrostro-bernstein:surya-APC01-A1-7B
unspecified
Mus musculus
  • buenrostro-bernstein:surya-APC01-A1-11B
unspecified
Mus musculus
  • buenrostro-bernstein:surya-APC01-A1-13B
unspecified
Mus musculus

MeasurementSet Input File Sets

5 items
single-cell ATAC-seq (SHARE-seq)
Mus musculus C57BL/6J colon tissue
single-cell ATAC-seq (SHARE-seq)
Mus musculus C57BL/6J colon tissue
single-cell ATAC-seq (SHARE-seq)
Mus musculus C57BL/6J colon tissue
single-cell RNA sequencing assay (SHARE-seq)
Mus musculus C57BL/6J colon tissue
single-cell RNA sequencing assay (SHARE-seq)
Mus musculus C57BL/6J colon tissue