IGVFDS5031MNRR

1{
2    "@context": "/terms/",
3    "@id": "/analysis-sets/IGVFDS5031MNRR/",
4    "@type": [
5        "AnalysisSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS5031MNRR",
10    "aliases": [
11        "jesse-engreitz:PPIF_enhancer_tiling_THP1_Variant-FlowFISH_analysis"
12    ],
13    "assay_titles": [
14        "Variant-EFFECTS"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "mismatched status",
20                "detail": "Released in vitro system [IGVFSM1367KBNP](/in-vitro-systems/IGVFSM1367KBNP/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_item_status",
24                "path": "/in-vitro-systems/IGVFSM1367KBNP/"
25            },
26            {
27                "category": "missing publication",
28                "detail": "In vitro system [IGVFSM1367KBNP](/in-vitro-systems/IGVFSM1367KBNP/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
29                "level": 30,
30                "level_name": "INTERNAL_ACTION",
31                "name": "audit_sample_missing_publication",
32                "path": "/in-vitro-systems/IGVFSM1367KBNP/"
33            },
34            {
35                "category": "mismatched status",
36                "detail": "Released in vitro system [IGVFSM7460SNVF](/in-vitro-systems/IGVFSM7460SNVF/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
37                "level": 30,
38                "level_name": "INTERNAL_ACTION",
39                "name": "audit_item_status",
40                "path": "/in-vitro-systems/IGVFSM7460SNVF/"
41            },
42            {
43                "category": "missing publication",
44                "detail": "In vitro system [IGVFSM7460SNVF](/in-vitro-systems/IGVFSM7460SNVF/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
45                "level": 30,
46                "level_name": "INTERNAL_ACTION",
47                "name": "audit_sample_missing_publication",
48                "path": "/in-vitro-systems/IGVFSM7460SNVF/"
49            },
50            {
51                "category": "mismatched status",
52                "detail": "Released in vitro system [IGVFSM3264VOCP](/in-vitro-systems/IGVFSM3264VOCP/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
53                "level": 30,
54                "level_name": "INTERNAL_ACTION",
55                "name": "audit_item_status",
56                "path": "/in-vitro-systems/IGVFSM3264VOCP/"
57            },
58            {
59                "category": "missing publication",
60                "detail": "In vitro system [IGVFSM3264VOCP](/in-vitro-systems/IGVFSM3264VOCP/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
61                "level": 30,
62                "level_name": "INTERNAL_ACTION",
63                "name": "audit_sample_missing_publication",
64                "path": "/in-vitro-systems/IGVFSM3264VOCP/"
65            },
66            {
67                "category": "mismatched status",
68                "detail": "Released in vitro system [IGVFSM2310CCFV](/in-vitro-systems/IGVFSM2310CCFV/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
69                "level": 30,
70                "level_name": "INTERNAL_ACTION",
71                "name": "audit_item_status",
72                "path": "/in-vitro-systems/IGVFSM2310CCFV/"
73            },
74            {
75                "category": "missing publication",
76                "detail": "In vitro system [IGVFSM2310CCFV](/in-vitro-systems/IGVFSM2310CCFV/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
77                "level": 30,
78                "level_name": "INTERNAL_ACTION",
79                "name": "audit_sample_missing_publication",
80                "path": "/in-vitro-systems/IGVFSM2310CCFV/"
81            },
82            {
83                "category": "mismatched status",
84                "detail": "Released in vitro system [IGVFSM9470HNZI](/in-vitro-systems/IGVFSM9470HNZI/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
85                "level": 30,
86                "level_name": "INTERNAL_ACTION",
87                "name": "audit_item_status",
88                "path": "/in-vitro-systems/IGVFSM9470HNZI/"
89            },
90            {
91                "category": "missing publication",
92                "detail": "In vitro system [IGVFSM9470HNZI](/in-vitro-systems/IGVFSM9470HNZI/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
93                "level": 30,
94                "level_name": "INTERNAL_ACTION",
95                "name": "audit_sample_missing_publication",
96                "path": "/in-vitro-systems/IGVFSM9470HNZI/"
97            },
98            {
99                "category": "mismatched status",
100                "detail": "Released in vitro system [IGVFSM0450DIVA](/in-vitro-systems/IGVFSM0450DIVA/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
101                "level": 30,
102                "level_name": "INTERNAL_ACTION",
103                "name": "audit_item_status",
104                "path": "/in-vitro-systems/IGVFSM0450DIVA/"
105            },
106            {
107                "category": "missing publication",
108                "detail": "In vitro system [IGVFSM0450DIVA](/in-vitro-systems/IGVFSM0450DIVA/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
109                "level": 30,
110                "level_name": "INTERNAL_ACTION",
111                "name": "audit_sample_missing_publication",
112                "path": "/in-vitro-systems/IGVFSM0450DIVA/"
113            },
114            {
115                "category": "mismatched status",
116                "detail": "Released in vitro system [IGVFSM0040UFBQ](/in-vitro-systems/IGVFSM0040UFBQ/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
117                "level": 30,
118                "level_name": "INTERNAL_ACTION",
119                "name": "audit_item_status",
120                "path": "/in-vitro-systems/IGVFSM0040UFBQ/"
121            },
122            {
123                "category": "missing publication",
124                "detail": "In vitro system [IGVFSM0040UFBQ](/in-vitro-systems/IGVFSM0040UFBQ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
125                "level": 30,
126                "level_name": "INTERNAL_ACTION",
127                "name": "audit_sample_missing_publication",
128                "path": "/in-vitro-systems/IGVFSM0040UFBQ/"
129            },
130            {
131                "category": "mismatched status",
132                "detail": "Released in vitro system [IGVFSM8585CWCE](/in-vitro-systems/IGVFSM8585CWCE/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
133                "level": 30,
134                "level_name": "INTERNAL_ACTION",
135                "name": "audit_item_status",
136                "path": "/in-vitro-systems/IGVFSM8585CWCE/"
137            },
138            {
139                "category": "missing publication",
140                "detail": "In vitro system [IGVFSM8585CWCE](/in-vitro-systems/IGVFSM8585CWCE/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
141                "level": 30,
142                "level_name": "INTERNAL_ACTION",
143                "name": "audit_sample_missing_publication",
144                "path": "/in-vitro-systems/IGVFSM8585CWCE/"
145            },
146            {
147                "category": "missing publication",
148                "detail": "In vitro system [IGVFSM0894QRYX](/in-vitro-systems/IGVFSM0894QRYX/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
149                "level": 30,
150                "level_name": "INTERNAL_ACTION",
151                "name": "audit_sample_missing_publication",
152                "path": "/in-vitro-systems/IGVFSM0894QRYX/"
153            },
154            {
155                "category": "mismatched status",
156                "detail": "Released in vitro system [IGVFSM5143PODP](/in-vitro-systems/IGVFSM5143PODP/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
157                "level": 30,
158                "level_name": "INTERNAL_ACTION",
159                "name": "audit_item_status",
160                "path": "/in-vitro-systems/IGVFSM5143PODP/"
161            },
162            {
163                "category": "missing publication",
164                "detail": "In vitro system [IGVFSM5143PODP](/in-vitro-systems/IGVFSM5143PODP/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
165                "level": 30,
166                "level_name": "INTERNAL_ACTION",
167                "name": "audit_sample_missing_publication",
168                "path": "/in-vitro-systems/IGVFSM5143PODP/"
169            },
170            {
171                "category": "mismatched status",
172                "detail": "Released in vitro system [IGVFSM1488CZUU](/in-vitro-systems/IGVFSM1488CZUU/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
173                "level": 30,
174                "level_name": "INTERNAL_ACTION",
175                "name": "audit_item_status",
176                "path": "/in-vitro-systems/IGVFSM1488CZUU/"
177            },
178            {
179                "category": "missing publication",
180                "detail": "In vitro system [IGVFSM1488CZUU](/in-vitro-systems/IGVFSM1488CZUU/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
181                "level": 30,
182                "level_name": "INTERNAL_ACTION",
183                "name": "audit_sample_missing_publication",
184                "path": "/in-vitro-systems/IGVFSM1488CZUU/"
185            },
186            {
187                "category": "mismatched status",
188                "detail": "Released in vitro system [IGVFSM7107DJSZ](/in-vitro-systems/IGVFSM7107DJSZ/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
189                "level": 30,
190                "level_name": "INTERNAL_ACTION",
191                "name": "audit_item_status",
192                "path": "/in-vitro-systems/IGVFSM7107DJSZ/"
193            },
194            {
195                "category": "missing publication",
196                "detail": "In vitro system [IGVFSM7107DJSZ](/in-vitro-systems/IGVFSM7107DJSZ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
197                "level": 30,
198                "level_name": "INTERNAL_ACTION",
199                "name": "audit_sample_missing_publication",
200                "path": "/in-vitro-systems/IGVFSM7107DJSZ/"
201            },
202            {
203                "category": "mismatched status",
204                "detail": "Released in vitro system [IGVFSM3794OZOG](/in-vitro-systems/IGVFSM3794OZOG/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
205                "level": 30,
206                "level_name": "INTERNAL_ACTION",
207                "name": "audit_item_status",
208                "path": "/in-vitro-systems/IGVFSM3794OZOG/"
209            },
210            {
211                "category": "missing publication",
212                "detail": "In vitro system [IGVFSM3794OZOG](/in-vitro-systems/IGVFSM3794OZOG/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
213                "level": 30,
214                "level_name": "INTERNAL_ACTION",
215                "name": "audit_sample_missing_publication",
216                "path": "/in-vitro-systems/IGVFSM3794OZOG/"
217            },
218            {
219                "category": "mismatched status",
220                "detail": "Released in vitro system [IGVFSM8646DYNI](/in-vitro-systems/IGVFSM8646DYNI/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
221                "level": 30,
222                "level_name": "INTERNAL_ACTION",
223                "name": "audit_item_status",
224                "path": "/in-vitro-systems/IGVFSM8646DYNI/"
225            },
226            {
227                "category": "missing publication",
228                "detail": "In vitro system [IGVFSM8646DYNI](/in-vitro-systems/IGVFSM8646DYNI/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
229                "level": 30,
230                "level_name": "INTERNAL_ACTION",
231                "name": "audit_sample_missing_publication",
232                "path": "/in-vitro-systems/IGVFSM8646DYNI/"
233            },
234            {
235                "category": "mismatched status",
236                "detail": "Released in vitro system [IGVFSM0906STHP](/in-vitro-systems/IGVFSM0906STHP/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
237                "level": 30,
238                "level_name": "INTERNAL_ACTION",
239                "name": "audit_item_status",
240                "path": "/in-vitro-systems/IGVFSM0906STHP/"
241            },
242            {
243                "category": "missing publication",
244                "detail": "In vitro system [IGVFSM0906STHP](/in-vitro-systems/IGVFSM0906STHP/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
245                "level": 30,
246                "level_name": "INTERNAL_ACTION",
247                "name": "audit_sample_missing_publication",
248                "path": "/in-vitro-systems/IGVFSM0906STHP/"
249            },
250            {
251                "category": "mismatched status",
252                "detail": "Released in vitro system [IGVFSM1664NEGX](/in-vitro-systems/IGVFSM1664NEGX/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
253                "level": 30,
254                "level_name": "INTERNAL_ACTION",
255                "name": "audit_item_status",
256                "path": "/in-vitro-systems/IGVFSM1664NEGX/"
257            },
258            {
259                "category": "missing publication",
260                "detail": "In vitro system [IGVFSM1664NEGX](/in-vitro-systems/IGVFSM1664NEGX/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
261                "level": 30,
262                "level_name": "INTERNAL_ACTION",
263                "name": "audit_sample_missing_publication",
264                "path": "/in-vitro-systems/IGVFSM1664NEGX/"
265            },
266            {
267                "category": "mismatched status",
268                "detail": "Released in vitro system [IGVFSM5918TEKW](/in-vitro-systems/IGVFSM5918TEKW/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
269                "level": 30,
270                "level_name": "INTERNAL_ACTION",
271                "name": "audit_item_status",
272                "path": "/in-vitro-systems/IGVFSM5918TEKW/"
273            },
274            {
275                "category": "missing publication",
276                "detail": "In vitro system [IGVFSM5918TEKW](/in-vitro-systems/IGVFSM5918TEKW/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
277                "level": 30,
278                "level_name": "INTERNAL_ACTION",
279                "name": "audit_sample_missing_publication",
280                "path": "/in-vitro-systems/IGVFSM5918TEKW/"
281            },
282            {
283                "category": "mismatched status",
284                "detail": "Released in vitro system [IGVFSM3771MMDC](/in-vitro-systems/IGVFSM3771MMDC/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
285                "level": 30,
286                "level_name": "INTERNAL_ACTION",
287                "name": "audit_item_status",
288                "path": "/in-vitro-systems/IGVFSM3771MMDC/"
289            },
290            {
291                "category": "missing publication",
292                "detail": "In vitro system [IGVFSM3771MMDC](/in-vitro-systems/IGVFSM3771MMDC/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
293                "level": 30,
294                "level_name": "INTERNAL_ACTION",
295                "name": "audit_sample_missing_publication",
296                "path": "/in-vitro-systems/IGVFSM3771MMDC/"
297            },
298            {
299                "category": "mismatched status",
300                "detail": "Released in vitro system [IGVFSM5444NCSW](/in-vitro-systems/IGVFSM5444NCSW/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
301                "level": 30,
302                "level_name": "INTERNAL_ACTION",
303                "name": "audit_item_status",
304                "path": "/in-vitro-systems/IGVFSM5444NCSW/"
305            },
306            {
307                "category": "missing publication",
308                "detail": "In vitro system [IGVFSM5444NCSW](/in-vitro-systems/IGVFSM5444NCSW/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
309                "level": 30,
310                "level_name": "INTERNAL_ACTION",
311                "name": "audit_sample_missing_publication",
312                "path": "/in-vitro-systems/IGVFSM5444NCSW/"
313            },
314            {
315                "category": "mismatched status",
316                "detail": "Released in vitro system [IGVFSM5040QPRO](/in-vitro-systems/IGVFSM5040QPRO/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
317                "level": 30,
318                "level_name": "INTERNAL_ACTION",
319                "name": "audit_item_status",
320                "path": "/in-vitro-systems/IGVFSM5040QPRO/"
321            },
322            {
323                "category": "missing publication",
324                "detail": "In vitro system [IGVFSM5040QPRO](/in-vitro-systems/IGVFSM5040QPRO/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
325                "level": 30,
326                "level_name": "INTERNAL_ACTION",
327                "name": "audit_sample_missing_publication",
328                "path": "/in-vitro-systems/IGVFSM5040QPRO/"
329            },
330            {
331                "category": "mismatched status",
332                "detail": "Released in vitro system [IGVFSM3467QAZR](/in-vitro-systems/IGVFSM3467QAZR/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
333                "level": 30,
334                "level_name": "INTERNAL_ACTION",
335                "name": "audit_item_status",
336                "path": "/in-vitro-systems/IGVFSM3467QAZR/"
337            },
338            {
339                "category": "missing publication",
340                "detail": "In vitro system [IGVFSM3467QAZR](/in-vitro-systems/IGVFSM3467QAZR/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
341                "level": 30,
342                "level_name": "INTERNAL_ACTION",
343                "name": "audit_sample_missing_publication",
344                "path": "/in-vitro-systems/IGVFSM3467QAZR/"
345            },
346            {
347                "category": "mismatched status",
348                "detail": "Released in vitro system [IGVFSM4715APXQ](/in-vitro-systems/IGVFSM4715APXQ/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
349                "level": 30,
350                "level_name": "INTERNAL_ACTION",
351                "name": "audit_item_status",
352                "path": "/in-vitro-systems/IGVFSM4715APXQ/"
353            },
354            {
355                "category": "missing publication",
356                "detail": "In vitro system [IGVFSM4715APXQ](/in-vitro-systems/IGVFSM4715APXQ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
357                "level": 30,
358                "level_name": "INTERNAL_ACTION",
359                "name": "audit_sample_missing_publication",
360                "path": "/in-vitro-systems/IGVFSM4715APXQ/"
361            },
362            {
363                "category": "mismatched status",
364                "detail": "Released in vitro system [IGVFSM7227LRMC](/in-vitro-systems/IGVFSM7227LRMC/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
365                "level": 30,
366                "level_name": "INTERNAL_ACTION",
367                "name": "audit_item_status",
368                "path": "/in-vitro-systems/IGVFSM7227LRMC/"
369            },
370            {
371                "category": "missing publication",
372                "detail": "In vitro system [IGVFSM7227LRMC](/in-vitro-systems/IGVFSM7227LRMC/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
373                "level": 30,
374                "level_name": "INTERNAL_ACTION",
375                "name": "audit_sample_missing_publication",
376                "path": "/in-vitro-systems/IGVFSM7227LRMC/"
377            },
378            {
379                "category": "mismatched status",
380                "detail": "Released in vitro system [IGVFSM5553HMSC](/in-vitro-systems/IGVFSM5553HMSC/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
381                "level": 30,
382                "level_name": "INTERNAL_ACTION",
383                "name": "audit_item_status",
384                "path": "/in-vitro-systems/IGVFSM5553HMSC/"
385            },
386            {
387                "category": "missing publication",
388                "detail": "In vitro system [IGVFSM5553HMSC](/in-vitro-systems/IGVFSM5553HMSC/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
389                "level": 30,
390                "level_name": "INTERNAL_ACTION",
391                "name": "audit_sample_missing_publication",
392                "path": "/in-vitro-systems/IGVFSM5553HMSC/"
393            },
394            {
395                "category": "mismatched status",
396                "detail": "Released in vitro system [IGVFSM6320VUBH](/in-vitro-systems/IGVFSM6320VUBH/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
397                "level": 30,
398                "level_name": "INTERNAL_ACTION",
399                "name": "audit_item_status",
400                "path": "/in-vitro-systems/IGVFSM6320VUBH/"
401            },
402            {
403                "category": "missing publication",
404                "detail": "In vitro system [IGVFSM6320VUBH](/in-vitro-systems/IGVFSM6320VUBH/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
405                "level": 30,
406                "level_name": "INTERNAL_ACTION",
407                "name": "audit_sample_missing_publication",
408                "path": "/in-vitro-systems/IGVFSM6320VUBH/"
409            },
410            {
411                "category": "mismatched status",
412                "detail": "Released in vitro system [IGVFSM4653AWMR](/in-vitro-systems/IGVFSM4653AWMR/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
413                "level": 30,
414                "level_name": "INTERNAL_ACTION",
415                "name": "audit_item_status",
416                "path": "/in-vitro-systems/IGVFSM4653AWMR/"
417            },
418            {
419                "category": "missing publication",
420                "detail": "In vitro system [IGVFSM4653AWMR](/in-vitro-systems/IGVFSM4653AWMR/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
421                "level": 30,
422                "level_name": "INTERNAL_ACTION",
423                "name": "audit_sample_missing_publication",
424                "path": "/in-vitro-systems/IGVFSM4653AWMR/"
425            },
426            {
427                "category": "mismatched status",
428                "detail": "Released in vitro system [IGVFSM9885ZFLQ](/in-vitro-systems/IGVFSM9885ZFLQ/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
429                "level": 30,
430                "level_name": "INTERNAL_ACTION",
431                "name": "audit_item_status",
432                "path": "/in-vitro-systems/IGVFSM9885ZFLQ/"
433            },
434            {
435                "category": "missing publication",
436                "detail": "In vitro system [IGVFSM9885ZFLQ](/in-vitro-systems/IGVFSM9885ZFLQ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
437                "level": 30,
438                "level_name": "INTERNAL_ACTION",
439                "name": "audit_sample_missing_publication",
440                "path": "/in-vitro-systems/IGVFSM9885ZFLQ/"
441            },
442            {
443                "category": "mismatched status",
444                "detail": "Released in vitro system [IGVFSM9682FICS](/in-vitro-systems/IGVFSM9682FICS/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
445                "level": 30,
446                "level_name": "INTERNAL_ACTION",
447                "name": "audit_item_status",
448                "path": "/in-vitro-systems/IGVFSM9682FICS/"
449            },
450            {
451                "category": "missing publication",
452                "detail": "In vitro system [IGVFSM9682FICS](/in-vitro-systems/IGVFSM9682FICS/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
453                "level": 30,
454                "level_name": "INTERNAL_ACTION",
455                "name": "audit_sample_missing_publication",
456                "path": "/in-vitro-systems/IGVFSM9682FICS/"
457            },
458            {
459                "category": "mismatched status",
460                "detail": "Released in vitro system [IGVFSM3035HZXX](/in-vitro-systems/IGVFSM3035HZXX/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
461                "level": 30,
462                "level_name": "INTERNAL_ACTION",
463                "name": "audit_item_status",
464                "path": "/in-vitro-systems/IGVFSM3035HZXX/"
465            },
466            {
467                "category": "missing publication",
468                "detail": "In vitro system [IGVFSM3035HZXX](/in-vitro-systems/IGVFSM3035HZXX/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
469                "level": 30,
470                "level_name": "INTERNAL_ACTION",
471                "name": "audit_sample_missing_publication",
472                "path": "/in-vitro-systems/IGVFSM3035HZXX/"
473            },
474            {
475                "category": "mismatched status",
476                "detail": "Released in vitro system [IGVFSM1683OFWB](/in-vitro-systems/IGVFSM1683OFWB/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
477                "level": 30,
478                "level_name": "INTERNAL_ACTION",
479                "name": "audit_item_status",
480                "path": "/in-vitro-systems/IGVFSM1683OFWB/"
481            },
482            {
483                "category": "missing publication",
484                "detail": "In vitro system [IGVFSM1683OFWB](/in-vitro-systems/IGVFSM1683OFWB/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
485                "level": 30,
486                "level_name": "INTERNAL_ACTION",
487                "name": "audit_sample_missing_publication",
488                "path": "/in-vitro-systems/IGVFSM1683OFWB/"
489            },
490            {
491                "category": "mismatched status",
492                "detail": "Released in vitro system [IGVFSM4866SSGO](/in-vitro-systems/IGVFSM4866SSGO/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
493                "level": 30,
494                "level_name": "INTERNAL_ACTION",
495                "name": "audit_item_status",
496                "path": "/in-vitro-systems/IGVFSM4866SSGO/"
497            },
498            {
499                "category": "missing publication",
500                "detail": "In vitro system [IGVFSM4866SSGO](/in-vitro-systems/IGVFSM4866SSGO/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
501                "level": 30,
502                "level_name": "INTERNAL_ACTION",
503                "name": "audit_sample_missing_publication",
504                "path": "/in-vitro-systems/IGVFSM4866SSGO/"
505            },
506            {
507                "category": "mismatched status",
508                "detail": "Released in vitro system [IGVFSM0686AMNU](/in-vitro-systems/IGVFSM0686AMNU/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
509                "level": 30,
510                "level_name": "INTERNAL_ACTION",
511                "name": "audit_item_status",
512                "path": "/in-vitro-systems/IGVFSM0686AMNU/"
513            },
514            {
515                "category": "missing publication",
516                "detail": "In vitro system [IGVFSM0686AMNU](/in-vitro-systems/IGVFSM0686AMNU/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
517                "level": 30,
518                "level_name": "INTERNAL_ACTION",
519                "name": "audit_sample_missing_publication",
520                "path": "/in-vitro-systems/IGVFSM0686AMNU/"
521            },
522            {
523                "category": "mismatched status",
524                "detail": "Released in vitro system [IGVFSM2185RMNT](/in-vitro-systems/IGVFSM2185RMNT/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
525                "level": 30,
526                "level_name": "INTERNAL_ACTION",
527                "name": "audit_item_status",
528                "path": "/in-vitro-systems/IGVFSM2185RMNT/"
529            },
530            {
531                "category": "missing publication",
532                "detail": "In vitro system [IGVFSM2185RMNT](/in-vitro-systems/IGVFSM2185RMNT/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
533                "level": 30,
534                "level_name": "INTERNAL_ACTION",
535                "name": "audit_sample_missing_publication",
536                "path": "/in-vitro-systems/IGVFSM2185RMNT/"
537            },
538            {
539                "category": "mismatched status",
540                "detail": "Released in vitro system [IGVFSM8031DKZT](/in-vitro-systems/IGVFSM8031DKZT/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
541                "level": 30,
542                "level_name": "INTERNAL_ACTION",
543                "name": "audit_item_status",
544                "path": "/in-vitro-systems/IGVFSM8031DKZT/"
545            },
546            {
547                "category": "missing publication",
548                "detail": "In vitro system [IGVFSM8031DKZT](/in-vitro-systems/IGVFSM8031DKZT/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
549                "level": 30,
550                "level_name": "INTERNAL_ACTION",
551                "name": "audit_sample_missing_publication",
552                "path": "/in-vitro-systems/IGVFSM8031DKZT/"
553            },
554            {
555                "category": "mismatched status",
556                "detail": "Released in vitro system [IGVFSM0841TQDY](/in-vitro-systems/IGVFSM0841TQDY/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
557                "level": 30,
558                "level_name": "INTERNAL_ACTION",
559                "name": "audit_item_status",
560                "path": "/in-vitro-systems/IGVFSM0841TQDY/"
561            },
562            {
563                "category": "missing publication",
564                "detail": "In vitro system [IGVFSM0841TQDY](/in-vitro-systems/IGVFSM0841TQDY/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
565                "level": 30,
566                "level_name": "INTERNAL_ACTION",
567                "name": "audit_sample_missing_publication",
568                "path": "/in-vitro-systems/IGVFSM0841TQDY/"
569            },
570            {
571                "category": "mismatched status",
572                "detail": "Released in vitro system [IGVFSM9725CVMG](/in-vitro-systems/IGVFSM9725CVMG/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
573                "level": 30,
574                "level_name": "INTERNAL_ACTION",
575                "name": "audit_item_status",
576                "path": "/in-vitro-systems/IGVFSM9725CVMG/"
577            },
578            {
579                "category": "missing publication",
580                "detail": "In vitro system [IGVFSM9725CVMG](/in-vitro-systems/IGVFSM9725CVMG/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
581                "level": 30,
582                "level_name": "INTERNAL_ACTION",
583                "name": "audit_sample_missing_publication",
584                "path": "/in-vitro-systems/IGVFSM9725CVMG/"
585            },
586            {
587                "category": "mismatched status",
588                "detail": "Released in vitro system [IGVFSM3275SABA](/in-vitro-systems/IGVFSM3275SABA/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
589                "level": 30,
590                "level_name": "INTERNAL_ACTION",
591                "name": "audit_item_status",
592                "path": "/in-vitro-systems/IGVFSM3275SABA/"
593            },
594            {
595                "category": "missing publication",
596                "detail": "In vitro system [IGVFSM3275SABA](/in-vitro-systems/IGVFSM3275SABA/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
597                "level": 30,
598                "level_name": "INTERNAL_ACTION",
599                "name": "audit_sample_missing_publication",
600                "path": "/in-vitro-systems/IGVFSM3275SABA/"
601            },
602            {
603                "category": "mismatched status",
604                "detail": "Released in vitro system [IGVFSM2837HWZC](/in-vitro-systems/IGVFSM2837HWZC/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
605                "level": 30,
606                "level_name": "INTERNAL_ACTION",
607                "name": "audit_item_status",
608                "path": "/in-vitro-systems/IGVFSM2837HWZC/"
609            },
610            {
611                "category": "missing publication",
612                "detail": "In vitro system [IGVFSM2837HWZC](/in-vitro-systems/IGVFSM2837HWZC/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
613                "level": 30,
614                "level_name": "INTERNAL_ACTION",
615                "name": "audit_sample_missing_publication",
616                "path": "/in-vitro-systems/IGVFSM2837HWZC/"
617            },
618            {
619                "category": "mismatched status",
620                "detail": "Released in vitro system [IGVFSM4531MGQB](/in-vitro-systems/IGVFSM4531MGQB/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
621                "level": 30,
622                "level_name": "INTERNAL_ACTION",
623                "name": "audit_item_status",
624                "path": "/in-vitro-systems/IGVFSM4531MGQB/"
625            },
626            {
627                "category": "missing publication",
628                "detail": "In vitro system [IGVFSM4531MGQB](/in-vitro-systems/IGVFSM4531MGQB/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
629                "level": 30,
630                "level_name": "INTERNAL_ACTION",
631                "name": "audit_sample_missing_publication",
632                "path": "/in-vitro-systems/IGVFSM4531MGQB/"
633            },
634            {
635                "category": "mismatched status",
636                "detail": "Released in vitro system [IGVFSM5729BNQM](/in-vitro-systems/IGVFSM5729BNQM/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
637                "level": 30,
638                "level_name": "INTERNAL_ACTION",
639                "name": "audit_item_status",
640                "path": "/in-vitro-systems/IGVFSM5729BNQM/"
641            },
642            {
643                "category": "missing publication",
644                "detail": "In vitro system [IGVFSM5729BNQM](/in-vitro-systems/IGVFSM5729BNQM/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
645                "level": 30,
646                "level_name": "INTERNAL_ACTION",
647                "name": "audit_sample_missing_publication",
648                "path": "/in-vitro-systems/IGVFSM5729BNQM/"
649            },
650            {
651                "category": "mismatched status",
652                "detail": "Released in vitro system [IGVFSM6331RKYX](/in-vitro-systems/IGVFSM6331RKYX/) has in progress subobject construct library set [IGVFDS2374NXLW](/construct-library-sets/IGVFDS2374NXLW/).",
653                "level": 30,
654                "level_name": "INTERNAL_ACTION",
655                "name": "audit_item_status",
656                "path": "/in-vitro-systems/IGVFSM6331RKYX/"
657            },
658            {
659                "category": "missing publication",
660                "detail": "In vitro system [IGVFSM6331RKYX](/in-vitro-systems/IGVFSM6331RKYX/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
661                "level": 30,
662                "level_name": "INTERNAL_ACTION",
663                "name": "audit_sample_missing_publication",
664                "path": "/in-vitro-systems/IGVFSM6331RKYX/"
665            },
666            {
667                "category": "missing publication",
668                "detail": "Analysis set [IGVFDS5031MNRR](/analysis-sets/IGVFDS5031MNRR/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
669                "level": 30,
670                "level_name": "INTERNAL_ACTION",
671                "name": "audit_file_set_missing_publication",
672                "path": "/analysis-sets/IGVFDS5031MNRR/"
673            }
674        ]
675    },
676    "award": {
677        "@id": "/awards/HG011972/",
678        "component": "functional characterization",
679        "contact_pi": {
680            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
681            "title": "Jesse Engreitz"
682        },
683        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
684    },
685    "construct_library_sets": [
686        {
687            "@id": "/construct-library-sets/IGVFDS2374NXLW/",
688            "accession": "IGVFDS2374NXLW",
689            "file_set_type": "guide library",
690            "status": "in progress",
691            "summary": "guide (sgRNA) library targeting sequence variants in a genomic locus"
692        }
693    ],
694    "control_for": [],
695    "creation_timestamp": "2023-12-16T20:41:18.434745+00:00",
696    "description": "Analysis of PPIF enhancer 5-bp tiling mutagenesis edit effects on PPIF expression that were measured by Variant-FlowFISH in THP-1 cells.",
697    "donors": [
698        {
699            "@id": "/human-donors/IGVFDO7359LVPI/",
700            "accession": "IGVFDO7359LVPI",
701            "aliases": [
702                "igvf:donor_of_THP1"
703            ],
704            "sex": "male",
705            "status": "released",
706            "taxa": "Homo sapiens"
707        }
708    ],
709    "file_set_type": "principal analysis",
710    "files": [
711        {
712            "@id": "/tabular-files/IGVFFI0647QQKM/",
713            "accession": "IGVFFI0647QQKM",
714            "aliases": [
715                "jesse-engreitz:PPIF_enhancer_tiling_THP1_Variant-FlowFISH_variant_effects_file"
716            ],
717            "assembly": "hg19",
718            "content_type": "variant effects",
719            "controlled_access": false,
720            "creation_timestamp": "2024-09-14T02:30:00.793890+00:00",
721            "file_format": "tsv",
722            "file_size": 6738,
723            "href": "/tabular-files/IGVFFI0647QQKM/@@download/IGVFFI0647QQKM.tsv.gz",
724            "s3_uri": "s3://igvf-files/2024/09/14/cd957423-dec8-48ec-a474-e0c630087e10/IGVFFI0647QQKM.tsv.gz",
725            "status": "in progress",
726            "submitted_file_name": "PPIF_enhancer_tiling_THP1_AllelicEffectsStats.tsv.gz",
727            "upload_status": "validated"
728        },
729        {
730            "@id": "/tabular-files/IGVFFI4333XLOF/",
731            "accession": "IGVFFI4333XLOF",
732            "aliases": [
733                "jesse-engreitz:PPIF_enhancer_tiling_THP1_Variant-EFFECTS_File_Standardized"
734            ],
735            "assembly": "GRCh38",
736            "content_type": "variant effects",
737            "controlled_access": false,
738            "creation_timestamp": "2025-03-29T00:18:16.450566+00:00",
739            "file_format": "tsv",
740            "file_size": 6642,
741            "href": "/tabular-files/IGVFFI4333XLOF/@@download/IGVFFI4333XLOF.tsv.gz",
742            "s3_uri": "s3://igvf-files/2025/03/29/ea13d9f1-a5a9-4608-a38c-84d1c39b6d3e/IGVFFI4333XLOF.tsv.gz",
743            "status": "in progress",
744            "submitted_file_name": "PPIF_enhancer_tiling_THP1_VariantEffectsFile.tsv.gz",
745            "upload_status": "validated"
746        }
747    ],
748    "functional_assay_mechanisms": [],
749    "input_file_sets": [
750        {
751            "@id": "/measurement-sets/IGVFDS2708HTXW/",
752            "accession": "IGVFDS2708HTXW",
753            "aliases": [
754                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinA_AmpliconSequencing"
755            ],
756            "file_set_type": "experimental data",
757            "status": "released"
758        },
759        {
760            "@id": "/measurement-sets/IGVFDS9345IHWB/",
761            "accession": "IGVFDS9345IHWB",
762            "aliases": [
763                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-FACS_Input_AmpliconSequencing"
764            ],
765            "file_set_type": "experimental data",
766            "status": "released"
767        },
768        {
769            "@id": "/measurement-sets/IGVFDS7952EIJE/",
770            "accession": "IGVFDS7952EIJE",
771            "aliases": [
772                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinB_AmpliconSequencing"
773            ],
774            "file_set_type": "experimental data",
775            "status": "released"
776        },
777        {
778            "@id": "/measurement-sets/IGVFDS9571BWRT/",
779            "accession": "IGVFDS9571BWRT",
780            "aliases": [
781                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinC_AmpliconSequencing"
782            ],
783            "file_set_type": "experimental data",
784            "status": "released"
785        },
786        {
787            "@id": "/measurement-sets/IGVFDS5405RYGU/",
788            "accession": "IGVFDS5405RYGU",
789            "aliases": [
790                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinD_AmpliconSequencing"
791            ],
792            "file_set_type": "experimental data",
793            "status": "released"
794        },
795        {
796            "@id": "/measurement-sets/IGVFDS4989HPTW/",
797            "accession": "IGVFDS4989HPTW",
798            "aliases": [
799                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-THP1-PE2_Exp1_NegControl_AmpliconSequencing"
800            ],
801            "file_set_type": "experimental data",
802            "status": "released"
803        },
804        {
805            "@id": "/measurement-sets/IGVFDS1144XHLC/",
806            "accession": "IGVFDS1144XHLC",
807            "aliases": [
808                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-BinA_AmpliconSequencing"
809            ],
810            "file_set_type": "experimental data",
811            "status": "released"
812        },
813        {
814            "@id": "/measurement-sets/IGVFDS6176JWXB/",
815            "accession": "IGVFDS6176JWXB",
816            "aliases": [
817                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-FACS_Input_AmpliconSequencing"
818            ],
819            "file_set_type": "experimental data",
820            "status": "released"
821        },
822        {
823            "@id": "/measurement-sets/IGVFDS2059ELNJ/",
824            "accession": "IGVFDS2059ELNJ",
825            "aliases": [
826                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-BinB_AmpliconSequencing"
827            ],
828            "file_set_type": "experimental data",
829            "status": "released"
830        },
831        {
832            "@id": "/measurement-sets/IGVFDS1183IGHQ/",
833            "accession": "IGVFDS1183IGHQ",
834            "aliases": [
835                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-BinC_AmpliconSequencing"
836            ],
837            "file_set_type": "experimental data",
838            "status": "released"
839        },
840        {
841            "@id": "/measurement-sets/IGVFDS7083JDYN/",
842            "accession": "IGVFDS7083JDYN",
843            "aliases": [
844                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD_AmpliconSequencing"
845            ],
846            "file_set_type": "experimental data",
847            "status": "released"
848        },
849        {
850            "@id": "/measurement-sets/IGVFDS6071XLAA/",
851            "accession": "IGVFDS6071XLAA",
852            "aliases": [
853                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinA_AmpliconSequencing"
854            ],
855            "file_set_type": "experimental data",
856            "status": "released"
857        },
858        {
859            "@id": "/measurement-sets/IGVFDS3823MIDB/",
860            "accession": "IGVFDS3823MIDB",
861            "aliases": [
862                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-FACS_Input_AmpliconSequencing"
863            ],
864            "file_set_type": "experimental data",
865            "status": "released"
866        },
867        {
868            "@id": "/measurement-sets/IGVFDS5341DFHM/",
869            "accession": "IGVFDS5341DFHM",
870            "aliases": [
871                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinB_AmpliconSequencing"
872            ],
873            "file_set_type": "experimental data",
874            "status": "released"
875        },
876        {
877            "@id": "/measurement-sets/IGVFDS1285SAVV/",
878            "accession": "IGVFDS1285SAVV",
879            "aliases": [
880                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinC_AmpliconSequencing"
881            ],
882            "file_set_type": "experimental data",
883            "status": "released"
884        },
885        {
886            "@id": "/measurement-sets/IGVFDS5477WNYP/",
887            "accession": "IGVFDS5477WNYP",
888            "aliases": [
889                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinD_AmpliconSequencing"
890            ],
891            "file_set_type": "experimental data",
892            "status": "released"
893        },
894        {
895            "@id": "/measurement-sets/IGVFDS3368XILR/",
896            "accession": "IGVFDS3368XILR",
897            "aliases": [
898                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-BinA_AmpliconSequencing"
899            ],
900            "file_set_type": "experimental data",
901            "status": "released"
902        },
903        {
904            "@id": "/measurement-sets/IGVFDS5892ADAN/",
905            "accession": "IGVFDS5892ADAN",
906            "aliases": [
907                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-FACS_Input_AmpliconSequencing"
908            ],
909            "file_set_type": "experimental data",
910            "status": "released"
911        },
912        {
913            "@id": "/measurement-sets/IGVFDS7933SDSN/",
914            "accession": "IGVFDS7933SDSN",
915            "aliases": [
916                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-BinB_AmpliconSequencing"
917            ],
918            "file_set_type": "experimental data",
919            "status": "released"
920        },
921        {
922            "@id": "/measurement-sets/IGVFDS0621TDYK/",
923            "accession": "IGVFDS0621TDYK",
924            "aliases": [
925                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-BinC_AmpliconSequencing"
926            ],
927            "file_set_type": "experimental data",
928            "status": "released"
929        },
930        {
931            "@id": "/measurement-sets/IGVFDS9179GDAL/",
932            "accession": "IGVFDS9179GDAL",
933            "aliases": [
934                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-BinD_AmpliconSequencing"
935            ],
936            "file_set_type": "experimental data",
937            "status": "released"
938        },
939        {
940            "@id": "/measurement-sets/IGVFDS8504HJPW/",
941            "accession": "IGVFDS8504HJPW",
942            "aliases": [
943                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-BinA_AmpliconSequencing"
944            ],
945            "file_set_type": "experimental data",
946            "status": "released"
947        },
948        {
949            "@id": "/measurement-sets/IGVFDS8518OHPN/",
950            "accession": "IGVFDS8518OHPN",
951            "aliases": [
952                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-FACS_Input_AmpliconSequencing"
953            ],
954            "file_set_type": "experimental data",
955            "status": "released"
956        },
957        {
958            "@id": "/measurement-sets/IGVFDS8339LZYX/",
959            "accession": "IGVFDS8339LZYX",
960            "aliases": [
961                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-BinB_AmpliconSequencing"
962            ],
963            "file_set_type": "experimental data",
964            "status": "released"
965        },
966        {
967            "@id": "/measurement-sets/IGVFDS8629CPYB/",
968            "accession": "IGVFDS8629CPYB",
969            "aliases": [
970                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-BinC_AmpliconSequencing"
971            ],
972            "file_set_type": "experimental data",
973            "status": "released"
974        },
975        {
976            "@id": "/measurement-sets/IGVFDS2890JPBI/",
977            "accession": "IGVFDS2890JPBI",
978            "aliases": [
979                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-BinD_AmpliconSequencing"
980            ],
981            "file_set_type": "experimental data",
982            "status": "released"
983        },
984        {
985            "@id": "/measurement-sets/IGVFDS0816EELG/",
986            "accession": "IGVFDS0816EELG",
987            "aliases": [
988                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-BinA_AmpliconSequencing"
989            ],
990            "file_set_type": "experimental data",
991            "status": "released"
992        },
993        {
994            "@id": "/measurement-sets/IGVFDS4386IYQY/",
995            "accession": "IGVFDS4386IYQY",
996            "aliases": [
997                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-FACS_Input_AmpliconSequencing"
998            ],
999            "file_set_type": "experimental data",
1000            "status": "released"
1001        },
1002        {
1003            "@id": "/measurement-sets/IGVFDS5601DSMT/",
1004            "accession": "IGVFDS5601DSMT",
1005            "aliases": [
1006                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-BinB_AmpliconSequencing"
1007            ],
1008            "file_set_type": "experimental data",
1009            "status": "released"
1010        },
1011        {
1012            "@id": "/measurement-sets/IGVFDS2074JWFW/",
1013            "accession": "IGVFDS2074JWFW",
1014            "aliases": [
1015                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-BinC_AmpliconSequencing"
1016            ],
1017            "file_set_type": "experimental data",
1018            "status": "released"
1019        },
1020        {
1021            "@id": "/measurement-sets/IGVFDS2972VXMB/",
1022            "accession": "IGVFDS2972VXMB",
1023            "aliases": [
1024                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-BinD_AmpliconSequencing"
1025            ],
1026            "file_set_type": "experimental data",
1027            "status": "released"
1028        },
1029        {
1030            "@id": "/measurement-sets/IGVFDS9915OTKB/",
1031            "accession": "IGVFDS9915OTKB",
1032            "aliases": [
1033                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinA_AmpliconSequencing"
1034            ],
1035            "file_set_type": "experimental data",
1036            "status": "released"
1037        },
1038        {
1039            "@id": "/measurement-sets/IGVFDS8050CYYG/",
1040            "accession": "IGVFDS8050CYYG",
1041            "aliases": [
1042                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-FACS_Input_AmpliconSequencing"
1043            ],
1044            "file_set_type": "experimental data",
1045            "status": "released"
1046        },
1047        {
1048            "@id": "/measurement-sets/IGVFDS0471SKEE/",
1049            "accession": "IGVFDS0471SKEE",
1050            "aliases": [
1051                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinB_AmpliconSequencing"
1052            ],
1053            "file_set_type": "experimental data",
1054            "status": "released"
1055        },
1056        {
1057            "@id": "/measurement-sets/IGVFDS9126DKWW/",
1058            "accession": "IGVFDS9126DKWW",
1059            "aliases": [
1060                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinC_AmpliconSequencing"
1061            ],
1062            "file_set_type": "experimental data",
1063            "status": "released"
1064        },
1065        {
1066            "@id": "/measurement-sets/IGVFDS6229XAIE/",
1067            "accession": "IGVFDS6229XAIE",
1068            "aliases": [
1069                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinD_AmpliconSequencing"
1070            ],
1071            "file_set_type": "experimental data",
1072            "status": "released"
1073        },
1074        {
1075            "@id": "/measurement-sets/IGVFDS4823GFCR/",
1076            "accession": "IGVFDS4823GFCR",
1077            "aliases": [
1078                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinA_AmpliconSequencing"
1079            ],
1080            "file_set_type": "experimental data",
1081            "status": "released"
1082        },
1083        {
1084            "@id": "/measurement-sets/IGVFDS4736IKQS/",
1085            "accession": "IGVFDS4736IKQS",
1086            "aliases": [
1087                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-FACS_Input_AmpliconSequencing"
1088            ],
1089            "file_set_type": "experimental data",
1090            "status": "released"
1091        },
1092        {
1093            "@id": "/measurement-sets/IGVFDS4670KYYZ/",
1094            "accession": "IGVFDS4670KYYZ",
1095            "aliases": [
1096                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinB_AmpliconSequencing"
1097            ],
1098            "file_set_type": "experimental data",
1099            "status": "released"
1100        },
1101        {
1102            "@id": "/measurement-sets/IGVFDS8825HZQT/",
1103            "accession": "IGVFDS8825HZQT",
1104            "aliases": [
1105                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinC_AmpliconSequencing"
1106            ],
1107            "file_set_type": "experimental data",
1108            "status": "released"
1109        },
1110        {
1111            "@id": "/measurement-sets/IGVFDS2690TJJM/",
1112            "accession": "IGVFDS2690TJJM",
1113            "aliases": [
1114                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinD_AmpliconSequencing"
1115            ],
1116            "file_set_type": "experimental data",
1117            "status": "released"
1118        }
1119    ],
1120    "input_for": [],
1121    "lab": {
1122        "@id": "/labs/jesse-engreitz/",
1123        "title": "Jesse Engreitz, Stanford"
1124    },
1125    "notes": "This object's file_set_type was primary analysis and has been updated to be principal analysis.",
1126    "protocols": [
1127        "https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1"
1128    ],
1129    "release_timestamp": "2023-12-20T23:11:20.370102+00:00",
1130    "sample_summary": "Homo sapiens THP-1 cell line, modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library, sorted on expression of PPIF",
1131    "samples": [
1132        {
1133            "@id": "/in-vitro-systems/IGVFSM1367KBNP/",
1134            "@type": [
1135                "InVitroSystem",
1136                "Biosample",
1137                "Sample",
1138                "Item"
1139            ],
1140            "accession": "IGVFSM1367KBNP",
1141            "aliases": [
1142                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-BinA"
1143            ],
1144            "classifications": [
1145                "cell line"
1146            ],
1147            "institutional_certificates": [],
1148            "modifications": [
1149                {
1150                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1151                    "modality": "prime editing",
1152                    "status": "released"
1153                }
1154            ],
1155            "sample_terms": [
1156                {
1157                    "@id": "/sample-terms/EFO_0001253/",
1158                    "@type": [
1159                        "SampleTerm",
1160                        "OntologyTerm",
1161                        "Item"
1162                    ],
1163                    "aliases": [
1164                        "igvf:THP-1"
1165                    ],
1166                    "status": "released",
1167                    "summary": "THP-1",
1168                    "term_name": "THP-1"
1169                }
1170            ],
1171            "status": "released",
1172            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1173            "taxa": "Homo sapiens"
1174        },
1175        {
1176            "@id": "/in-vitro-systems/IGVFSM7460SNVF/",
1177            "@type": [
1178                "InVitroSystem",
1179                "Biosample",
1180                "Sample",
1181                "Item"
1182            ],
1183            "accession": "IGVFSM7460SNVF",
1184            "aliases": [
1185                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinA"
1186            ],
1187            "classifications": [
1188                "cell line"
1189            ],
1190            "institutional_certificates": [],
1191            "modifications": [
1192                {
1193                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1194                    "modality": "prime editing",
1195                    "status": "released"
1196                }
1197            ],
1198            "sample_terms": [
1199                {
1200                    "@id": "/sample-terms/EFO_0001253/",
1201                    "@type": [
1202                        "SampleTerm",
1203                        "OntologyTerm",
1204                        "Item"
1205                    ],
1206                    "aliases": [
1207                        "igvf:THP-1"
1208                    ],
1209                    "status": "released",
1210                    "summary": "THP-1",
1211                    "term_name": "THP-1"
1212                }
1213            ],
1214            "status": "released",
1215            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1216            "taxa": "Homo sapiens"
1217        },
1218        {
1219            "@id": "/in-vitro-systems/IGVFSM3264VOCP/",
1220            "@type": [
1221                "InVitroSystem",
1222                "Biosample",
1223                "Sample",
1224                "Item"
1225            ],
1226            "accession": "IGVFSM3264VOCP",
1227            "aliases": [
1228                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-BinC"
1229            ],
1230            "classifications": [
1231                "cell line"
1232            ],
1233            "institutional_certificates": [],
1234            "modifications": [
1235                {
1236                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1237                    "modality": "prime editing",
1238                    "status": "released"
1239                }
1240            ],
1241            "sample_terms": [
1242                {
1243                    "@id": "/sample-terms/EFO_0001253/",
1244                    "@type": [
1245                        "SampleTerm",
1246                        "OntologyTerm",
1247                        "Item"
1248                    ],
1249                    "aliases": [
1250                        "igvf:THP-1"
1251                    ],
1252                    "status": "released",
1253                    "summary": "THP-1",
1254                    "term_name": "THP-1"
1255                }
1256            ],
1257            "status": "released",
1258            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1259            "taxa": "Homo sapiens"
1260        },
1261        {
1262            "@id": "/in-vitro-systems/IGVFSM2310CCFV/",
1263            "@type": [
1264                "InVitroSystem",
1265                "Biosample",
1266                "Sample",
1267                "Item"
1268            ],
1269            "accession": "IGVFSM2310CCFV",
1270            "aliases": [
1271                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinD"
1272            ],
1273            "classifications": [
1274                "cell line"
1275            ],
1276            "institutional_certificates": [],
1277            "modifications": [
1278                {
1279                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1280                    "modality": "prime editing",
1281                    "status": "released"
1282                }
1283            ],
1284            "sample_terms": [
1285                {
1286                    "@id": "/sample-terms/EFO_0001253/",
1287                    "@type": [
1288                        "SampleTerm",
1289                        "OntologyTerm",
1290                        "Item"
1291                    ],
1292                    "aliases": [
1293                        "igvf:THP-1"
1294                    ],
1295                    "status": "released",
1296                    "summary": "THP-1",
1297                    "term_name": "THP-1"
1298                }
1299            ],
1300            "status": "released",
1301            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1302            "taxa": "Homo sapiens"
1303        },
1304        {
1305            "@id": "/in-vitro-systems/IGVFSM9470HNZI/",
1306            "@type": [
1307                "InVitroSystem",
1308                "Biosample",
1309                "Sample",
1310                "Item"
1311            ],
1312            "accession": "IGVFSM9470HNZI",
1313            "aliases": [
1314                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-BinB"
1315            ],
1316            "classifications": [
1317                "cell line"
1318            ],
1319            "institutional_certificates": [],
1320            "modifications": [
1321                {
1322                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1323                    "modality": "prime editing",
1324                    "status": "released"
1325                }
1326            ],
1327            "sample_terms": [
1328                {
1329                    "@id": "/sample-terms/EFO_0001253/",
1330                    "@type": [
1331                        "SampleTerm",
1332                        "OntologyTerm",
1333                        "Item"
1334                    ],
1335                    "aliases": [
1336                        "igvf:THP-1"
1337                    ],
1338                    "status": "released",
1339                    "summary": "THP-1",
1340                    "term_name": "THP-1"
1341                }
1342            ],
1343            "status": "released",
1344            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1345            "taxa": "Homo sapiens"
1346        },
1347        {
1348            "@id": "/in-vitro-systems/IGVFSM0450DIVA/",
1349            "@type": [
1350                "InVitroSystem",
1351                "Biosample",
1352                "Sample",
1353                "Item"
1354            ],
1355            "accession": "IGVFSM0450DIVA",
1356            "aliases": [
1357                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-BinC"
1358            ],
1359            "classifications": [
1360                "cell line"
1361            ],
1362            "institutional_certificates": [],
1363            "modifications": [
1364                {
1365                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1366                    "modality": "prime editing",
1367                    "status": "released"
1368                }
1369            ],
1370            "sample_terms": [
1371                {
1372                    "@id": "/sample-terms/EFO_0001253/",
1373                    "@type": [
1374                        "SampleTerm",
1375                        "OntologyTerm",
1376                        "Item"
1377                    ],
1378                    "aliases": [
1379                        "igvf:THP-1"
1380                    ],
1381                    "status": "released",
1382                    "summary": "THP-1",
1383                    "term_name": "THP-1"
1384                }
1385            ],
1386            "status": "released",
1387            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1388            "taxa": "Homo sapiens"
1389        },
1390        {
1391            "@id": "/in-vitro-systems/IGVFSM0040UFBQ/",
1392            "@type": [
1393                "InVitroSystem",
1394                "Biosample",
1395                "Sample",
1396                "Item"
1397            ],
1398            "accession": "IGVFSM0040UFBQ",
1399            "aliases": [
1400                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-BinA"
1401            ],
1402            "classifications": [
1403                "cell line"
1404            ],
1405            "institutional_certificates": [],
1406            "modifications": [
1407                {
1408                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1409                    "modality": "prime editing",
1410                    "status": "released"
1411                }
1412            ],
1413            "sample_terms": [
1414                {
1415                    "@id": "/sample-terms/EFO_0001253/",
1416                    "@type": [
1417                        "SampleTerm",
1418                        "OntologyTerm",
1419                        "Item"
1420                    ],
1421                    "aliases": [
1422                        "igvf:THP-1"
1423                    ],
1424                    "status": "released",
1425                    "summary": "THP-1",
1426                    "term_name": "THP-1"
1427                }
1428            ],
1429            "status": "released",
1430            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1431            "taxa": "Homo sapiens"
1432        },
1433        {
1434            "@id": "/in-vitro-systems/IGVFSM8585CWCE/",
1435            "@type": [
1436                "InVitroSystem",
1437                "Biosample",
1438                "Sample",
1439                "Item"
1440            ],
1441            "accession": "IGVFSM8585CWCE",
1442            "aliases": [
1443                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-FACS_Input"
1444            ],
1445            "classifications": [
1446                "cell line"
1447            ],
1448            "institutional_certificates": [],
1449            "modifications": [
1450                {
1451                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1452                    "modality": "prime editing",
1453                    "status": "released"
1454                }
1455            ],
1456            "sample_terms": [
1457                {
1458                    "@id": "/sample-terms/EFO_0001253/",
1459                    "@type": [
1460                        "SampleTerm",
1461                        "OntologyTerm",
1462                        "Item"
1463                    ],
1464                    "aliases": [
1465                        "igvf:THP-1"
1466                    ],
1467                    "status": "released",
1468                    "summary": "THP-1",
1469                    "term_name": "THP-1"
1470                }
1471            ],
1472            "status": "released",
1473            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1474            "taxa": "Homo sapiens"
1475        },
1476        {
1477            "@id": "/in-vitro-systems/IGVFSM5143PODP/",
1478            "@type": [
1479                "InVitroSystem",
1480                "Biosample",
1481                "Sample",
1482                "Item"
1483            ],
1484            "accession": "IGVFSM5143PODP",
1485            "aliases": [
1486                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-BinA"
1487            ],
1488            "classifications": [
1489                "cell line"
1490            ],
1491            "institutional_certificates": [],
1492            "modifications": [
1493                {
1494                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1495                    "modality": "prime editing",
1496                    "status": "released"
1497                }
1498            ],
1499            "sample_terms": [
1500                {
1501                    "@id": "/sample-terms/EFO_0001253/",
1502                    "@type": [
1503                        "SampleTerm",
1504                        "OntologyTerm",
1505                        "Item"
1506                    ],
1507                    "aliases": [
1508                        "igvf:THP-1"
1509                    ],
1510                    "status": "released",
1511                    "summary": "THP-1",
1512                    "term_name": "THP-1"
1513                }
1514            ],
1515            "status": "released",
1516            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1517            "taxa": "Homo sapiens"
1518        },
1519        {
1520            "@id": "/in-vitro-systems/IGVFSM1488CZUU/",
1521            "@type": [
1522                "InVitroSystem",
1523                "Biosample",
1524                "Sample",
1525                "Item"
1526            ],
1527            "accession": "IGVFSM1488CZUU",
1528            "aliases": [
1529                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinC"
1530            ],
1531            "classifications": [
1532                "cell line"
1533            ],
1534            "institutional_certificates": [],
1535            "modifications": [
1536                {
1537                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1538                    "modality": "prime editing",
1539                    "status": "released"
1540                }
1541            ],
1542            "sample_terms": [
1543                {
1544                    "@id": "/sample-terms/EFO_0001253/",
1545                    "@type": [
1546                        "SampleTerm",
1547                        "OntologyTerm",
1548                        "Item"
1549                    ],
1550                    "aliases": [
1551                        "igvf:THP-1"
1552                    ],
1553                    "status": "released",
1554                    "summary": "THP-1",
1555                    "term_name": "THP-1"
1556                }
1557            ],
1558            "status": "released",
1559            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1560            "taxa": "Homo sapiens"
1561        },
1562        {
1563            "@id": "/in-vitro-systems/IGVFSM7107DJSZ/",
1564            "@type": [
1565                "InVitroSystem",
1566                "Biosample",
1567                "Sample",
1568                "Item"
1569            ],
1570            "accession": "IGVFSM7107DJSZ",
1571            "aliases": [
1572                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-FACS_Input"
1573            ],
1574            "classifications": [
1575                "cell line"
1576            ],
1577            "institutional_certificates": [],
1578            "modifications": [
1579                {
1580                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1581                    "modality": "prime editing",
1582                    "status": "released"
1583                }
1584            ],
1585            "sample_terms": [
1586                {
1587                    "@id": "/sample-terms/EFO_0001253/",
1588                    "@type": [
1589                        "SampleTerm",
1590                        "OntologyTerm",
1591                        "Item"
1592                    ],
1593                    "aliases": [
1594                        "igvf:THP-1"
1595                    ],
1596                    "status": "released",
1597                    "summary": "THP-1",
1598                    "term_name": "THP-1"
1599                }
1600            ],
1601            "status": "released",
1602            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1603            "taxa": "Homo sapiens"
1604        },
1605        {
1606            "@id": "/in-vitro-systems/IGVFSM3794OZOG/",
1607            "@type": [
1608                "InVitroSystem",
1609                "Biosample",
1610                "Sample",
1611                "Item"
1612            ],
1613            "accession": "IGVFSM3794OZOG",
1614            "aliases": [
1615                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinB"
1616            ],
1617            "classifications": [
1618                "cell line"
1619            ],
1620            "institutional_certificates": [],
1621            "modifications": [
1622                {
1623                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1624                    "modality": "prime editing",
1625                    "status": "released"
1626                }
1627            ],
1628            "sample_terms": [
1629                {
1630                    "@id": "/sample-terms/EFO_0001253/",
1631                    "@type": [
1632                        "SampleTerm",
1633                        "OntologyTerm",
1634                        "Item"
1635                    ],
1636                    "aliases": [
1637                        "igvf:THP-1"
1638                    ],
1639                    "status": "released",
1640                    "summary": "THP-1",
1641                    "term_name": "THP-1"
1642                }
1643            ],
1644            "status": "released",
1645            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1646            "taxa": "Homo sapiens"
1647        },
1648        {
1649            "@id": "/in-vitro-systems/IGVFSM8646DYNI/",
1650            "@type": [
1651                "InVitroSystem",
1652                "Biosample",
1653                "Sample",
1654                "Item"
1655            ],
1656            "accession": "IGVFSM8646DYNI",
1657            "aliases": [
1658                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinA"
1659            ],
1660            "classifications": [
1661                "cell line"
1662            ],
1663            "institutional_certificates": [],
1664            "modifications": [
1665                {
1666                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1667                    "modality": "prime editing",
1668                    "status": "released"
1669                }
1670            ],
1671            "sample_terms": [
1672                {
1673                    "@id": "/sample-terms/EFO_0001253/",
1674                    "@type": [
1675                        "SampleTerm",
1676                        "OntologyTerm",
1677                        "Item"
1678                    ],
1679                    "aliases": [
1680                        "igvf:THP-1"
1681                    ],
1682                    "status": "released",
1683                    "summary": "THP-1",
1684                    "term_name": "THP-1"
1685                }
1686            ],
1687            "status": "released",
1688            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1689            "taxa": "Homo sapiens"
1690        },
1691        {
1692            "@id": "/in-vitro-systems/IGVFSM0906STHP/",
1693            "@type": [
1694                "InVitroSystem",
1695                "Biosample",
1696                "Sample",
1697                "Item"
1698            ],
1699            "accession": "IGVFSM0906STHP",
1700            "aliases": [
1701                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-FACS_Input"
1702            ],
1703            "classifications": [
1704                "cell line"
1705            ],
1706            "institutional_certificates": [],
1707            "modifications": [
1708                {
1709                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1710                    "modality": "prime editing",
1711                    "status": "released"
1712                }
1713            ],
1714            "sample_terms": [
1715                {
1716                    "@id": "/sample-terms/EFO_0001253/",
1717                    "@type": [
1718                        "SampleTerm",
1719                        "OntologyTerm",
1720                        "Item"
1721                    ],
1722                    "aliases": [
1723                        "igvf:THP-1"
1724                    ],
1725                    "status": "released",
1726                    "summary": "THP-1",
1727                    "term_name": "THP-1"
1728                }
1729            ],
1730            "status": "released",
1731            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1732            "taxa": "Homo sapiens"
1733        },
1734        {
1735            "@id": "/in-vitro-systems/IGVFSM1664NEGX/",
1736            "@type": [
1737                "InVitroSystem",
1738                "Biosample",
1739                "Sample",
1740                "Item"
1741            ],
1742            "accession": "IGVFSM1664NEGX",
1743            "aliases": [
1744                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinB"
1745            ],
1746            "classifications": [
1747                "cell line"
1748            ],
1749            "institutional_certificates": [],
1750            "modifications": [
1751                {
1752                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1753                    "modality": "prime editing",
1754                    "status": "released"
1755                }
1756            ],
1757            "sample_terms": [
1758                {
1759                    "@id": "/sample-terms/EFO_0001253/",
1760                    "@type": [
1761                        "SampleTerm",
1762                        "OntologyTerm",
1763                        "Item"
1764                    ],
1765                    "aliases": [
1766                        "igvf:THP-1"
1767                    ],
1768                    "status": "released",
1769                    "summary": "THP-1",
1770                    "term_name": "THP-1"
1771                }
1772            ],
1773            "status": "released",
1774            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1775            "taxa": "Homo sapiens"
1776        },
1777        {
1778            "@id": "/in-vitro-systems/IGVFSM5918TEKW/",
1779            "@type": [
1780                "InVitroSystem",
1781                "Biosample",
1782                "Sample",
1783                "Item"
1784            ],
1785            "accession": "IGVFSM5918TEKW",
1786            "aliases": [
1787                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-FACS_Input"
1788            ],
1789            "classifications": [
1790                "cell line"
1791            ],
1792            "institutional_certificates": [],
1793            "modifications": [
1794                {
1795                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1796                    "modality": "prime editing",
1797                    "status": "released"
1798                }
1799            ],
1800            "sample_terms": [
1801                {
1802                    "@id": "/sample-terms/EFO_0001253/",
1803                    "@type": [
1804                        "SampleTerm",
1805                        "OntologyTerm",
1806                        "Item"
1807                    ],
1808                    "aliases": [
1809                        "igvf:THP-1"
1810                    ],
1811                    "status": "released",
1812                    "summary": "THP-1",
1813                    "term_name": "THP-1"
1814                }
1815            ],
1816            "status": "released",
1817            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1818            "taxa": "Homo sapiens"
1819        },
1820        {
1821            "@id": "/in-vitro-systems/IGVFSM3771MMDC/",
1822            "@type": [
1823                "InVitroSystem",
1824                "Biosample",
1825                "Sample",
1826                "Item"
1827            ],
1828            "accession": "IGVFSM3771MMDC",
1829            "aliases": [
1830                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-BinC"
1831            ],
1832            "classifications": [
1833                "cell line"
1834            ],
1835            "institutional_certificates": [],
1836            "modifications": [
1837                {
1838                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1839                    "modality": "prime editing",
1840                    "status": "released"
1841                }
1842            ],
1843            "sample_terms": [
1844                {
1845                    "@id": "/sample-terms/EFO_0001253/",
1846                    "@type": [
1847                        "SampleTerm",
1848                        "OntologyTerm",
1849                        "Item"
1850                    ],
1851                    "aliases": [
1852                        "igvf:THP-1"
1853                    ],
1854                    "status": "released",
1855                    "summary": "THP-1",
1856                    "term_name": "THP-1"
1857                }
1858            ],
1859            "status": "released",
1860            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1861            "taxa": "Homo sapiens"
1862        },
1863        {
1864            "@id": "/in-vitro-systems/IGVFSM5444NCSW/",
1865            "@type": [
1866                "InVitroSystem",
1867                "Biosample",
1868                "Sample",
1869                "Item"
1870            ],
1871            "accession": "IGVFSM5444NCSW",
1872            "aliases": [
1873                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-BinD"
1874            ],
1875            "classifications": [
1876                "cell line"
1877            ],
1878            "institutional_certificates": [],
1879            "modifications": [
1880                {
1881                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1882                    "modality": "prime editing",
1883                    "status": "released"
1884                }
1885            ],
1886            "sample_terms": [
1887                {
1888                    "@id": "/sample-terms/EFO_0001253/",
1889                    "@type": [
1890                        "SampleTerm",
1891                        "OntologyTerm",
1892                        "Item"
1893                    ],
1894                    "aliases": [
1895                        "igvf:THP-1"
1896                    ],
1897                    "status": "released",
1898                    "summary": "THP-1",
1899                    "term_name": "THP-1"
1900                }
1901            ],
1902            "status": "released",
1903            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1904            "taxa": "Homo sapiens"
1905        },
1906        {
1907            "@id": "/in-vitro-systems/IGVFSM5040QPRO/",
1908            "@type": [
1909                "InVitroSystem",
1910                "Biosample",
1911                "Sample",
1912                "Item"
1913            ],
1914            "accession": "IGVFSM5040QPRO",
1915            "aliases": [
1916                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinA"
1917            ],
1918            "classifications": [
1919                "cell line"
1920            ],
1921            "institutional_certificates": [],
1922            "modifications": [
1923                {
1924                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1925                    "modality": "prime editing",
1926                    "status": "released"
1927                }
1928            ],
1929            "sample_terms": [
1930                {
1931                    "@id": "/sample-terms/EFO_0001253/",
1932                    "@type": [
1933                        "SampleTerm",
1934                        "OntologyTerm",
1935                        "Item"
1936                    ],
1937                    "aliases": [
1938                        "igvf:THP-1"
1939                    ],
1940                    "status": "released",
1941                    "summary": "THP-1",
1942                    "term_name": "THP-1"
1943                }
1944            ],
1945            "status": "released",
1946            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1947            "taxa": "Homo sapiens"
1948        },
1949        {
1950            "@id": "/in-vitro-systems/IGVFSM3467QAZR/",
1951            "@type": [
1952                "InVitroSystem",
1953                "Biosample",
1954                "Sample",
1955                "Item"
1956            ],
1957            "accession": "IGVFSM3467QAZR",
1958            "aliases": [
1959                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-FACS_Input"
1960            ],
1961            "classifications": [
1962                "cell line"
1963            ],
1964            "institutional_certificates": [],
1965            "modifications": [
1966                {
1967                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
1968                    "modality": "prime editing",
1969                    "status": "released"
1970                }
1971            ],
1972            "sample_terms": [
1973                {
1974                    "@id": "/sample-terms/EFO_0001253/",
1975                    "@type": [
1976                        "SampleTerm",
1977                        "OntologyTerm",
1978                        "Item"
1979                    ],
1980                    "aliases": [
1981                        "igvf:THP-1"
1982                    ],
1983                    "status": "released",
1984                    "summary": "THP-1",
1985                    "term_name": "THP-1"
1986                }
1987            ],
1988            "status": "released",
1989            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
1990            "taxa": "Homo sapiens"
1991        },
1992        {
1993            "@id": "/in-vitro-systems/IGVFSM4715APXQ/",
1994            "@type": [
1995                "InVitroSystem",
1996                "Biosample",
1997                "Sample",
1998                "Item"
1999            ],
2000            "accession": "IGVFSM4715APXQ",
2001            "aliases": [
2002                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinC"
2003            ],
2004            "classifications": [
2005                "cell line"
2006            ],
2007            "institutional_certificates": [],
2008            "modifications": [
2009                {
2010                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2011                    "modality": "prime editing",
2012                    "status": "released"
2013                }
2014            ],
2015            "sample_terms": [
2016                {
2017                    "@id": "/sample-terms/EFO_0001253/",
2018                    "@type": [
2019                        "SampleTerm",
2020                        "OntologyTerm",
2021                        "Item"
2022                    ],
2023                    "aliases": [
2024                        "igvf:THP-1"
2025                    ],
2026                    "status": "released",
2027                    "summary": "THP-1",
2028                    "term_name": "THP-1"
2029                }
2030            ],
2031            "status": "released",
2032            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2033            "taxa": "Homo sapiens"
2034        },
2035        {
2036            "@id": "/in-vitro-systems/IGVFSM7227LRMC/",
2037            "@type": [
2038                "InVitroSystem",
2039                "Biosample",
2040                "Sample",
2041                "Item"
2042            ],
2043            "accession": "IGVFSM7227LRMC",
2044            "aliases": [
2045                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinB"
2046            ],
2047            "classifications": [
2048                "cell line"
2049            ],
2050            "institutional_certificates": [],
2051            "modifications": [
2052                {
2053                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2054                    "modality": "prime editing",
2055                    "status": "released"
2056                }
2057            ],
2058            "sample_terms": [
2059                {
2060                    "@id": "/sample-terms/EFO_0001253/",
2061                    "@type": [
2062                        "SampleTerm",
2063                        "OntologyTerm",
2064                        "Item"
2065                    ],
2066                    "aliases": [
2067                        "igvf:THP-1"
2068                    ],
2069                    "status": "released",
2070                    "summary": "THP-1",
2071                    "term_name": "THP-1"
2072                }
2073            ],
2074            "status": "released",
2075            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2076            "taxa": "Homo sapiens"
2077        },
2078        {
2079            "@id": "/in-vitro-systems/IGVFSM5553HMSC/",
2080            "@type": [
2081                "InVitroSystem",
2082                "Biosample",
2083                "Sample",
2084                "Item"
2085            ],
2086            "accession": "IGVFSM5553HMSC",
2087            "aliases": [
2088                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinC"
2089            ],
2090            "classifications": [
2091                "cell line"
2092            ],
2093            "institutional_certificates": [],
2094            "modifications": [
2095                {
2096                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2097                    "modality": "prime editing",
2098                    "status": "released"
2099                }
2100            ],
2101            "sample_terms": [
2102                {
2103                    "@id": "/sample-terms/EFO_0001253/",
2104                    "@type": [
2105                        "SampleTerm",
2106                        "OntologyTerm",
2107                        "Item"
2108                    ],
2109                    "aliases": [
2110                        "igvf:THP-1"
2111                    ],
2112                    "status": "released",
2113                    "summary": "THP-1",
2114                    "term_name": "THP-1"
2115                }
2116            ],
2117            "status": "released",
2118            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2119            "taxa": "Homo sapiens"
2120        },
2121        {
2122            "@id": "/in-vitro-systems/IGVFSM6320VUBH/",
2123            "@type": [
2124                "InVitroSystem",
2125                "Biosample",
2126                "Sample",
2127                "Item"
2128            ],
2129            "accession": "IGVFSM6320VUBH",
2130            "aliases": [
2131                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-BinD"
2132            ],
2133            "classifications": [
2134                "cell line"
2135            ],
2136            "institutional_certificates": [],
2137            "modifications": [
2138                {
2139                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2140                    "modality": "prime editing",
2141                    "status": "released"
2142                }
2143            ],
2144            "sample_terms": [
2145                {
2146                    "@id": "/sample-terms/EFO_0001253/",
2147                    "@type": [
2148                        "SampleTerm",
2149                        "OntologyTerm",
2150                        "Item"
2151                    ],
2152                    "aliases": [
2153                        "igvf:THP-1"
2154                    ],
2155                    "status": "released",
2156                    "summary": "THP-1",
2157                    "term_name": "THP-1"
2158                }
2159            ],
2160            "status": "released",
2161            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2162            "taxa": "Homo sapiens"
2163        },
2164        {
2165            "@id": "/in-vitro-systems/IGVFSM4653AWMR/",
2166            "@type": [
2167                "InVitroSystem",
2168                "Biosample",
2169                "Sample",
2170                "Item"
2171            ],
2172            "accession": "IGVFSM4653AWMR",
2173            "aliases": [
2174                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinA"
2175            ],
2176            "classifications": [
2177                "cell line"
2178            ],
2179            "institutional_certificates": [],
2180            "modifications": [
2181                {
2182                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2183                    "modality": "prime editing",
2184                    "status": "released"
2185                }
2186            ],
2187            "sample_terms": [
2188                {
2189                    "@id": "/sample-terms/EFO_0001253/",
2190                    "@type": [
2191                        "SampleTerm",
2192                        "OntologyTerm",
2193                        "Item"
2194                    ],
2195                    "aliases": [
2196                        "igvf:THP-1"
2197                    ],
2198                    "status": "released",
2199                    "summary": "THP-1",
2200                    "term_name": "THP-1"
2201                }
2202            ],
2203            "status": "released",
2204            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2205            "taxa": "Homo sapiens"
2206        },
2207        {
2208            "@id": "/in-vitro-systems/IGVFSM9885ZFLQ/",
2209            "@type": [
2210                "InVitroSystem",
2211                "Biosample",
2212                "Sample",
2213                "Item"
2214            ],
2215            "accession": "IGVFSM9885ZFLQ",
2216            "aliases": [
2217                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinD"
2218            ],
2219            "classifications": [
2220                "cell line"
2221            ],
2222            "institutional_certificates": [],
2223            "modifications": [
2224                {
2225                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2226                    "modality": "prime editing",
2227                    "status": "released"
2228                }
2229            ],
2230            "sample_terms": [
2231                {
2232                    "@id": "/sample-terms/EFO_0001253/",
2233                    "@type": [
2234                        "SampleTerm",
2235                        "OntologyTerm",
2236                        "Item"
2237                    ],
2238                    "aliases": [
2239                        "igvf:THP-1"
2240                    ],
2241                    "status": "released",
2242                    "summary": "THP-1",
2243                    "term_name": "THP-1"
2244                }
2245            ],
2246            "status": "released",
2247            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2248            "taxa": "Homo sapiens"
2249        },
2250        {
2251            "@id": "/in-vitro-systems/IGVFSM9682FICS/",
2252            "@type": [
2253                "InVitroSystem",
2254                "Biosample",
2255                "Sample",
2256                "Item"
2257            ],
2258            "accession": "IGVFSM9682FICS",
2259            "aliases": [
2260                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-BinD"
2261            ],
2262            "classifications": [
2263                "cell line"
2264            ],
2265            "institutional_certificates": [],
2266            "modifications": [
2267                {
2268                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2269                    "modality": "prime editing",
2270                    "status": "released"
2271                }
2272            ],
2273            "sample_terms": [
2274                {
2275                    "@id": "/sample-terms/EFO_0001253/",
2276                    "@type": [
2277                        "SampleTerm",
2278                        "OntologyTerm",
2279                        "Item"
2280                    ],
2281                    "aliases": [
2282                        "igvf:THP-1"
2283                    ],
2284                    "status": "released",
2285                    "summary": "THP-1",
2286                    "term_name": "THP-1"
2287                }
2288            ],
2289            "status": "released",
2290            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2291            "taxa": "Homo sapiens"
2292        },
2293        {
2294            "@id": "/in-vitro-systems/IGVFSM3035HZXX/",
2295            "@type": [
2296                "InVitroSystem",
2297                "Biosample",
2298                "Sample",
2299                "Item"
2300            ],
2301            "accession": "IGVFSM3035HZXX",
2302            "aliases": [
2303                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep4-BinB"
2304            ],
2305            "classifications": [
2306                "cell line"
2307            ],
2308            "institutional_certificates": [],
2309            "modifications": [
2310                {
2311                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2312                    "modality": "prime editing",
2313                    "status": "released"
2314                }
2315            ],
2316            "sample_terms": [
2317                {
2318                    "@id": "/sample-terms/EFO_0001253/",
2319                    "@type": [
2320                        "SampleTerm",
2321                        "OntologyTerm",
2322                        "Item"
2323                    ],
2324                    "aliases": [
2325                        "igvf:THP-1"
2326                    ],
2327                    "status": "released",
2328                    "summary": "THP-1",
2329                    "term_name": "THP-1"
2330                }
2331            ],
2332            "status": "released",
2333            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2334            "taxa": "Homo sapiens"
2335        },
2336        {
2337            "@id": "/in-vitro-systems/IGVFSM1683OFWB/",
2338            "@type": [
2339                "InVitroSystem",
2340                "Biosample",
2341                "Sample",
2342                "Item"
2343            ],
2344            "accession": "IGVFSM1683OFWB",
2345            "aliases": [
2346                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-BinB"
2347            ],
2348            "classifications": [
2349                "cell line"
2350            ],
2351            "institutional_certificates": [],
2352            "modifications": [
2353                {
2354                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2355                    "modality": "prime editing",
2356                    "status": "released"
2357                }
2358            ],
2359            "sample_terms": [
2360                {
2361                    "@id": "/sample-terms/EFO_0001253/",
2362                    "@type": [
2363                        "SampleTerm",
2364                        "OntologyTerm",
2365                        "Item"
2366                    ],
2367                    "aliases": [
2368                        "igvf:THP-1"
2369                    ],
2370                    "status": "released",
2371                    "summary": "THP-1",
2372                    "term_name": "THP-1"
2373                }
2374            ],
2375            "status": "released",
2376            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2377            "taxa": "Homo sapiens"
2378        },
2379        {
2380            "@id": "/in-vitro-systems/IGVFSM4866SSGO/",
2381            "@type": [
2382                "InVitroSystem",
2383                "Biosample",
2384                "Sample",
2385                "Item"
2386            ],
2387            "accession": "IGVFSM4866SSGO",
2388            "aliases": [
2389                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-FACS_Input"
2390            ],
2391            "classifications": [
2392                "cell line"
2393            ],
2394            "institutional_certificates": [],
2395            "modifications": [
2396                {
2397                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2398                    "modality": "prime editing",
2399                    "status": "released"
2400                }
2401            ],
2402            "sample_terms": [
2403                {
2404                    "@id": "/sample-terms/EFO_0001253/",
2405                    "@type": [
2406                        "SampleTerm",
2407                        "OntologyTerm",
2408                        "Item"
2409                    ],
2410                    "aliases": [
2411                        "igvf:THP-1"
2412                    ],
2413                    "status": "released",
2414                    "summary": "THP-1",
2415                    "term_name": "THP-1"
2416                }
2417            ],
2418            "status": "released",
2419            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2420            "taxa": "Homo sapiens"
2421        },
2422        {
2423            "@id": "/in-vitro-systems/IGVFSM0686AMNU/",
2424            "@type": [
2425                "InVitroSystem",
2426                "Biosample",
2427                "Sample",
2428                "Item"
2429            ],
2430            "accession": "IGVFSM0686AMNU",
2431            "aliases": [
2432                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinB"
2433            ],
2434            "classifications": [
2435                "cell line"
2436            ],
2437            "institutional_certificates": [],
2438            "modifications": [
2439                {
2440                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2441                    "modality": "prime editing",
2442                    "status": "released"
2443                }
2444            ],
2445            "sample_terms": [
2446                {
2447                    "@id": "/sample-terms/EFO_0001253/",
2448                    "@type": [
2449                        "SampleTerm",
2450                        "OntologyTerm",
2451                        "Item"
2452                    ],
2453                    "aliases": [
2454                        "igvf:THP-1"
2455                    ],
2456                    "status": "released",
2457                    "summary": "THP-1",
2458                    "term_name": "THP-1"
2459                }
2460            ],
2461            "status": "released",
2462            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2463            "taxa": "Homo sapiens"
2464        },
2465        {
2466            "@id": "/in-vitro-systems/IGVFSM2185RMNT/",
2467            "@type": [
2468                "InVitroSystem",
2469                "Biosample",
2470                "Sample",
2471                "Item"
2472            ],
2473            "accession": "IGVFSM2185RMNT",
2474            "aliases": [
2475                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-FACS_Input"
2476            ],
2477            "classifications": [
2478                "cell line"
2479            ],
2480            "institutional_certificates": [],
2481            "modifications": [
2482                {
2483                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2484                    "modality": "prime editing",
2485                    "status": "released"
2486                }
2487            ],
2488            "sample_terms": [
2489                {
2490                    "@id": "/sample-terms/EFO_0001253/",
2491                    "@type": [
2492                        "SampleTerm",
2493                        "OntologyTerm",
2494                        "Item"
2495                    ],
2496                    "aliases": [
2497                        "igvf:THP-1"
2498                    ],
2499                    "status": "released",
2500                    "summary": "THP-1",
2501                    "term_name": "THP-1"
2502                }
2503            ],
2504            "status": "released",
2505            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2506            "taxa": "Homo sapiens"
2507        },
2508        {
2509            "@id": "/in-vitro-systems/IGVFSM8031DKZT/",
2510            "@type": [
2511                "InVitroSystem",
2512                "Biosample",
2513                "Sample",
2514                "Item"
2515            ],
2516            "accession": "IGVFSM8031DKZT",
2517            "aliases": [
2518                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD"
2519            ],
2520            "classifications": [
2521                "cell line"
2522            ],
2523            "institutional_certificates": [],
2524            "modifications": [
2525                {
2526                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2527                    "modality": "prime editing",
2528                    "status": "released"
2529                }
2530            ],
2531            "sample_terms": [
2532                {
2533                    "@id": "/sample-terms/EFO_0001253/",
2534                    "@type": [
2535                        "SampleTerm",
2536                        "OntologyTerm",
2537                        "Item"
2538                    ],
2539                    "aliases": [
2540                        "igvf:THP-1"
2541                    ],
2542                    "status": "released",
2543                    "summary": "THP-1",
2544                    "term_name": "THP-1"
2545                }
2546            ],
2547            "status": "released",
2548            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2549            "taxa": "Homo sapiens"
2550        },
2551        {
2552            "@id": "/in-vitro-systems/IGVFSM0841TQDY/",
2553            "@type": [
2554                "InVitroSystem",
2555                "Biosample",
2556                "Sample",
2557                "Item"
2558            ],
2559            "accession": "IGVFSM0841TQDY",
2560            "aliases": [
2561                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep1-BinA"
2562            ],
2563            "classifications": [
2564                "cell line"
2565            ],
2566            "institutional_certificates": [],
2567            "modifications": [
2568                {
2569                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2570                    "modality": "prime editing",
2571                    "status": "released"
2572                }
2573            ],
2574            "sample_terms": [
2575                {
2576                    "@id": "/sample-terms/EFO_0001253/",
2577                    "@type": [
2578                        "SampleTerm",
2579                        "OntologyTerm",
2580                        "Item"
2581                    ],
2582                    "aliases": [
2583                        "igvf:THP-1"
2584                    ],
2585                    "status": "released",
2586                    "summary": "THP-1",
2587                    "term_name": "THP-1"
2588                }
2589            ],
2590            "status": "released",
2591            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2592            "taxa": "Homo sapiens"
2593        },
2594        {
2595            "@id": "/in-vitro-systems/IGVFSM9725CVMG/",
2596            "@type": [
2597                "InVitroSystem",
2598                "Biosample",
2599                "Sample",
2600                "Item"
2601            ],
2602            "accession": "IGVFSM9725CVMG",
2603            "aliases": [
2604                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep2-BinC"
2605            ],
2606            "classifications": [
2607                "cell line"
2608            ],
2609            "institutional_certificates": [],
2610            "modifications": [
2611                {
2612                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2613                    "modality": "prime editing",
2614                    "status": "released"
2615                }
2616            ],
2617            "sample_terms": [
2618                {
2619                    "@id": "/sample-terms/EFO_0001253/",
2620                    "@type": [
2621                        "SampleTerm",
2622                        "OntologyTerm",
2623                        "Item"
2624                    ],
2625                    "aliases": [
2626                        "igvf:THP-1"
2627                    ],
2628                    "status": "released",
2629                    "summary": "THP-1",
2630                    "term_name": "THP-1"
2631                }
2632            ],
2633            "status": "released",
2634            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2635            "taxa": "Homo sapiens"
2636        },
2637        {
2638            "@id": "/in-vitro-systems/IGVFSM3275SABA/",
2639            "@type": [
2640                "InVitroSystem",
2641                "Biosample",
2642                "Sample",
2643                "Item"
2644            ],
2645            "accession": "IGVFSM3275SABA",
2646            "aliases": [
2647                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinC"
2648            ],
2649            "classifications": [
2650                "cell line"
2651            ],
2652            "institutional_certificates": [],
2653            "modifications": [
2654                {
2655                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2656                    "modality": "prime editing",
2657                    "status": "released"
2658                }
2659            ],
2660            "sample_terms": [
2661                {
2662                    "@id": "/sample-terms/EFO_0001253/",
2663                    "@type": [
2664                        "SampleTerm",
2665                        "OntologyTerm",
2666                        "Item"
2667                    ],
2668                    "aliases": [
2669                        "igvf:THP-1"
2670                    ],
2671                    "status": "released",
2672                    "summary": "THP-1",
2673                    "term_name": "THP-1"
2674                }
2675            ],
2676            "status": "released",
2677            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2678            "taxa": "Homo sapiens"
2679        },
2680        {
2681            "@id": "/in-vitro-systems/IGVFSM2837HWZC/",
2682            "@type": [
2683                "InVitroSystem",
2684                "Biosample",
2685                "Sample",
2686                "Item"
2687            ],
2688            "accession": "IGVFSM2837HWZC",
2689            "aliases": [
2690                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep2-BinB"
2691            ],
2692            "classifications": [
2693                "cell line"
2694            ],
2695            "institutional_certificates": [],
2696            "modifications": [
2697                {
2698                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2699                    "modality": "prime editing",
2700                    "status": "released"
2701                }
2702            ],
2703            "sample_terms": [
2704                {
2705                    "@id": "/sample-terms/EFO_0001253/",
2706                    "@type": [
2707                        "SampleTerm",
2708                        "OntologyTerm",
2709                        "Item"
2710                    ],
2711                    "aliases": [
2712                        "igvf:THP-1"
2713                    ],
2714                    "status": "released",
2715                    "summary": "THP-1",
2716                    "term_name": "THP-1"
2717                }
2718            ],
2719            "status": "released",
2720            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2721            "taxa": "Homo sapiens"
2722        },
2723        {
2724            "@id": "/in-vitro-systems/IGVFSM4531MGQB/",
2725            "@type": [
2726                "InVitroSystem",
2727                "Biosample",
2728                "Sample",
2729                "Item"
2730            ],
2731            "accession": "IGVFSM4531MGQB",
2732            "aliases": [
2733                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinD"
2734            ],
2735            "classifications": [
2736                "cell line"
2737            ],
2738            "institutional_certificates": [],
2739            "modifications": [
2740                {
2741                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2742                    "modality": "prime editing",
2743                    "status": "released"
2744                }
2745            ],
2746            "sample_terms": [
2747                {
2748                    "@id": "/sample-terms/EFO_0001253/",
2749                    "@type": [
2750                        "SampleTerm",
2751                        "OntologyTerm",
2752                        "Item"
2753                    ],
2754                    "aliases": [
2755                        "igvf:THP-1"
2756                    ],
2757                    "status": "released",
2758                    "summary": "THP-1",
2759                    "term_name": "THP-1"
2760                }
2761            ],
2762            "status": "released",
2763            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2764            "taxa": "Homo sapiens"
2765        },
2766        {
2767            "@id": "/in-vitro-systems/IGVFSM5729BNQM/",
2768            "@type": [
2769                "InVitroSystem",
2770                "Biosample",
2771                "Sample",
2772                "Item"
2773            ],
2774            "accession": "IGVFSM5729BNQM",
2775            "aliases": [
2776                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-FACS_Input"
2777            ],
2778            "classifications": [
2779                "cell line"
2780            ],
2781            "institutional_certificates": [],
2782            "modifications": [
2783                {
2784                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2785                    "modality": "prime editing",
2786                    "status": "released"
2787                }
2788            ],
2789            "sample_terms": [
2790                {
2791                    "@id": "/sample-terms/EFO_0001253/",
2792                    "@type": [
2793                        "SampleTerm",
2794                        "OntologyTerm",
2795                        "Item"
2796                    ],
2797                    "aliases": [
2798                        "igvf:THP-1"
2799                    ],
2800                    "status": "released",
2801                    "summary": "THP-1",
2802                    "term_name": "THP-1"
2803                }
2804            ],
2805            "status": "released",
2806            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2807            "taxa": "Homo sapiens"
2808        },
2809        {
2810            "@id": "/in-vitro-systems/IGVFSM6331RKYX/",
2811            "@type": [
2812                "InVitroSystem",
2813                "Biosample",
2814                "Sample",
2815                "Item"
2816            ],
2817            "accession": "IGVFSM6331RKYX",
2818            "aliases": [
2819                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinD"
2820            ],
2821            "classifications": [
2822                "cell line"
2823            ],
2824            "institutional_certificates": [],
2825            "modifications": [
2826                {
2827                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2828                    "modality": "prime editing",
2829                    "status": "released"
2830                }
2831            ],
2832            "sample_terms": [
2833                {
2834                    "@id": "/sample-terms/EFO_0001253/",
2835                    "@type": [
2836                        "SampleTerm",
2837                        "OntologyTerm",
2838                        "Item"
2839                    ],
2840                    "aliases": [
2841                        "igvf:THP-1"
2842                    ],
2843                    "status": "released",
2844                    "summary": "THP-1",
2845                    "term_name": "THP-1"
2846                }
2847            ],
2848            "status": "released",
2849            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2850            "taxa": "Homo sapiens"
2851        },
2852        {
2853            "@id": "/in-vitro-systems/IGVFSM0894QRYX/",
2854            "@type": [
2855                "InVitroSystem",
2856                "Biosample",
2857                "Sample",
2858                "Item"
2859            ],
2860            "accession": "IGVFSM0894QRYX",
2861            "aliases": [
2862                "jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-THP1-PE2_Exp1_NegControl"
2863            ],
2864            "classifications": [
2865                "cell line"
2866            ],
2867            "institutional_certificates": [],
2868            "modifications": [
2869                {
2870                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2871                    "modality": "prime editing",
2872                    "status": "released"
2873                }
2874            ],
2875            "sample_terms": [
2876                {
2877                    "@id": "/sample-terms/EFO_0001253/",
2878                    "@type": [
2879                        "SampleTerm",
2880                        "OntologyTerm",
2881                        "Item"
2882                    ],
2883                    "aliases": [
2884                        "igvf:THP-1"
2885                    ],
2886                    "status": "released",
2887                    "summary": "THP-1",
2888                    "term_name": "THP-1"
2889                }
2890            ],
2891            "status": "released",
2892            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)",
2893            "taxa": "Homo sapiens"
2894        }
2895    ],
2896    "schema_version": "9",
2897    "status": "released",
2898    "submitted_by": {
2899        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
2900        "title": "Michael Montgomery"
2901    },
2902    "submitted_files_timestamp": "2024-09-14T02:30:00.793890+00:00",
2903    "submitter_comment": "Analysis of PPIF enhancer 5-bp tiling mutagenesis edit effects on PPIF expression that were measured by Variant-FlowFISH in THP-1 cells.",
2904    "summary": "prime editing Variant-EFFECTS targeting PPIF: variant effects",
2905    "uuid": "a4d027f3-e6dc-4d35-b906-0fc85c2f018e",
2906    "workflows": [
2907        {
2908            "@id": "/workflows/IGVFWF0099SJHI/",
2909            "accession": "IGVFWF0099SJHI",
2910            "name": "Variant-EFFECTS Pipeline",
2911            "status": "in progress",
2912            "uniform_pipeline": false
2913        }
2914    ]
2915}