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IGVFDS4582MPNU

released
Aliases
charles-gersbach:cd8-tcells-analysis-set-rna-seq-batf3-overexpression
File Set Type
principal analysis
Summary
RNA-seq: fold change over control, transcript quantifications, transcriptome alignments
Workflows
Publications
Samples
CD8-positive, alpha-beta memory T cell primary cell, transfected with a expression vector library
Protocols

Files

8 items
bam
transcriptome alignments
GRCh38 filtered transcriptome alignments
Charles Gersbach, Duke
1.3 GB
filtered
validated
bam
transcriptome alignments
GRCh38 filtered transcriptome alignments
Charles Gersbach, Duke
1.6 GB
filtered
validated
bam
transcriptome alignments
GRCh38 filtered transcriptome alignments
Charles Gersbach, Duke
1.6 GB
filtered
validated
bam
transcriptome alignments
GRCh38 filtered transcriptome alignments
Charles Gersbach, Duke
1.2 GB
filtered
validated
bam
transcriptome alignments
GRCh38 filtered transcriptome alignments
Charles Gersbach, Duke
1.5 GB
filtered
validated
tsv
fold change over control
GRCh38 fold change over control
Charles Gersbach, Duke
1.2 MB
validated
tsv
transcript quantifications
GRCh38 transcript quantifications
Charles Gersbach, Duke
505 KB
validated
bam
transcriptome alignments
GRCh38 filtered transcriptome alignments
Charles Gersbach, Duke
1.4 GB
filtered
validated

File Association Graph

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File Set
File
AnalysisSet
MeasurementSet

Samples

6 items
Sample Terms
Associated Construct Library Sets
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

Donors

3 items
Aliases
  • charles-gersbach:cd8-tcells-donor-10
unspecified
Homo sapiens
  • charles-gersbach:cd8-tcells-donor-11
unspecified
Homo sapiens
  • charles-gersbach:cd8-tcells-donor-9
unspecified
Homo sapiens

Associated Construct Library Sets

2 items
Summary
Library Design Files
expression vector library of BATF3
control transduction expression vector library

MeasurementSet Input File Sets

6 items
Controls
control transduction RNA-seq integrating a control transduction expression vector library
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
control transduction RNA-seq integrating a control transduction expression vector library
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
control transduction RNA-seq integrating a control transduction expression vector library
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
RNA-seq integrating an expression vector library of BATF3
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
RNA-seq integrating an expression vector library of BATF3
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
RNA-seq integrating an expression vector library of BATF3
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke