{
"@context": "/terms/",
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"FileSet",
"Item"
],
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],
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],
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"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released multiplexed sample [IGVFSM5245KVZO](/multiplexed-samples/IGVFSM5245KVZO/) has in progress subobject tabular file [IGVFFI2383CFVI](/tabular-files/IGVFFI2383CFVI/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/multiplexed-samples/IGVFSM5245KVZO/"
},
{
"category": "mismatched status",
"detail": "Released matrix file [IGVFFI3202KBBO](/matrix-files/IGVFFI3202KBBO/) has in progress subobject reference file [IGVFFI3944QOJF](/reference-files/IGVFFI3944QOJF/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/matrix-files/IGVFFI3202KBBO/"
},
{
"category": "mismatched status",
"detail": "Released matrix file [IGVFFI3202KBBO](/matrix-files/IGVFFI3202KBBO/) has in progress subobject reference file [IGVFFI8311QXYM](/reference-files/IGVFFI8311QXYM/).",
"level": 30,
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"name": "audit_item_status",
"path": "/matrix-files/IGVFFI3202KBBO/"
},
{
"category": "missing demultiplexed sample",
"detail": "Analysis set [IGVFDS4570PZIO](/analysis-sets/IGVFDS4570PZIO/) has `input_file_sets` with multiplexed samples: [IGVFSM5245KVZO](/multiplexed-samples/IGVFSM5245KVZO/) but no `demultiplexed_sample`. Analysis sets with multiplexed samples are expected to specify a demultiplexed sample.",
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}
]
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"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
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"institutional_certificates": [
{
"@id": "/institutional-certificates/1926d993-629d-42d9-a962-f391ea6ee18f/",
"certificate_identifier": "IP115-23",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/EFO_0004905/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "induced pluripotent stem cell",
"term_name": "induced pluripotent stem cell"
}
],
"status": "released",
"summary": "multiplexed sample: Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 11 days; Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 3 days; ... and 6 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "9",
"status": "released",
"submitted_by": {
"@id": "/users/6667a92a-d202-493a-8c7d-7a56d1380356/",
"title": "Khine Lin"
},
"submitted_files_timestamp": "2025-02-14T22:53:34.714393+00:00",
"summary": "10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix",
"uuid": "2de05138-1f89-4410-a528-1417d3feb0f7",
"workflows": [
{
"@id": "/workflows/IGVFWF1453HVEC/",
"accession": "IGVFWF1453HVEC",
"name": "Satpathy Cell Ranger",
"status": "released",
"uniform_pipeline": false
}
]
}