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IGVFDS4340KVZI

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HMB
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Aliases
harinder-singh:Bcells_don1_pitt_multiome_day012_analysis_set
File Set Type
intermediate analysis
Summary
single-nucleus ATAC-seq (10x multiome), single-nucleus RNA sequencing assay (10x multiome)
Workflows
Samples
Homo sapiens B differentiated cell specimen induced to plasmablast, at 2 day(s) post change
Protocols
Attribution
Harinder Singh, University of Pittsburgh

Files

3 items
tsv
fragments
fragments
Harinder Singh, University of Pittsburgh
1.8 GB
validated
hdf5
raw feature barcode matrix
cell by gene expression in raw feature barcode matrix
Harinder Singh, University of Pittsburgh
393 MB
validated
csv
barcode to element mapping
barcode to element mapping
Harinder Singh, University of Pittsburgh
17 MB
validated

File Association Graph

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File Set
File
AnalysisSet
MeasurementSet

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days

Donors

1 item
Accession
Aliases
Sex
Taxa
  • harinder-singh:donor_1
male
Homo sapiens

MeasurementSet Input File Sets

2 items
single-nucleus ATAC-seq (10x multiome)
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days
single-nucleus RNA sequencing assay (10x multiome)
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days

File Sets Using This Analysis Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
single-nucleus ATAC-seq (10x multiome), single-nucleus RNA sequencing assay (10x multiome)
  • harinder-singh:Bcells_don1_pitt_multiome_aggr_analysis_set
Harinder Singh, University of Pittsburgh