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IGVFDS3609QWUZ

released
Aliases
charles-gersbach:cd8-tcells-intermediate-set-atac-seq-chronic-activation-gfp
File Set Type
intermediate analysis
Summary
ATAC-seq: alignments
Publications
Samples
CD8-positive, alpha-beta memory T cell primary cell, transfected with a expression vector library
Protocols

Files

2 items
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
1.5 GB
validated
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
1.6 GB
validated

File Association Graph

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File Set
File
AnalysisSet
MeasurementSet

Samples

2 items
Sample Terms
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

Donors

2 items
Aliases
  • charles-gersbach:cd8-tcells-donor-10
unspecified
Homo sapiens
  • charles-gersbach:cd8-tcells-donor-9
unspecified
Homo sapiens

MeasurementSet Input File Sets

2 items
Associated Construct Library Sets
ATAC-seq integrating a control transduction expression vector library
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
ATAC-seq integrating a control transduction expression vector library
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

File Sets Using This Analysis Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
ATAC-seq: fold change over control, peak quantifications
  • charles-gersbach:cd8-tcells-analysis-set-atac-seq-chronic-activation-batf3
Charles Gersbach, Duke

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke