IGVFDS3423PSID

1{
2    "@context": "/terms/",
3    "@id": "/analysis-sets/IGVFDS3423PSID/",
4    "@type": [
5        "AnalysisSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS3423PSID",
10    "aliases": [
11        "jesse-engreitz:PPIF_promoter_tiling_THP1_Variant-FlowFISH_analysis"
12    ],
13    "assay_titles": [
14        "Variant-EFFECTS"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "mismatched status",
20                "detail": "Released in vitro system [IGVFSM9197BHPY](/in-vitro-systems/IGVFSM9197BHPY/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_item_status",
24                "path": "/in-vitro-systems/IGVFSM9197BHPY/"
25            },
26            {
27                "category": "missing publication",
28                "detail": "In vitro system [IGVFSM9197BHPY](/in-vitro-systems/IGVFSM9197BHPY/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
29                "level": 30,
30                "level_name": "INTERNAL_ACTION",
31                "name": "audit_sample_missing_publication",
32                "path": "/in-vitro-systems/IGVFSM9197BHPY/"
33            },
34            {
35                "category": "mismatched status",
36                "detail": "Released in vitro system [IGVFSM5150FUTV](/in-vitro-systems/IGVFSM5150FUTV/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
37                "level": 30,
38                "level_name": "INTERNAL_ACTION",
39                "name": "audit_item_status",
40                "path": "/in-vitro-systems/IGVFSM5150FUTV/"
41            },
42            {
43                "category": "missing publication",
44                "detail": "In vitro system [IGVFSM5150FUTV](/in-vitro-systems/IGVFSM5150FUTV/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
45                "level": 30,
46                "level_name": "INTERNAL_ACTION",
47                "name": "audit_sample_missing_publication",
48                "path": "/in-vitro-systems/IGVFSM5150FUTV/"
49            },
50            {
51                "category": "mismatched status",
52                "detail": "Released in vitro system [IGVFSM9876ONTE](/in-vitro-systems/IGVFSM9876ONTE/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
53                "level": 30,
54                "level_name": "INTERNAL_ACTION",
55                "name": "audit_item_status",
56                "path": "/in-vitro-systems/IGVFSM9876ONTE/"
57            },
58            {
59                "category": "missing publication",
60                "detail": "In vitro system [IGVFSM9876ONTE](/in-vitro-systems/IGVFSM9876ONTE/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
61                "level": 30,
62                "level_name": "INTERNAL_ACTION",
63                "name": "audit_sample_missing_publication",
64                "path": "/in-vitro-systems/IGVFSM9876ONTE/"
65            },
66            {
67                "category": "mismatched status",
68                "detail": "Released in vitro system [IGVFSM2408BZVR](/in-vitro-systems/IGVFSM2408BZVR/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
69                "level": 30,
70                "level_name": "INTERNAL_ACTION",
71                "name": "audit_item_status",
72                "path": "/in-vitro-systems/IGVFSM2408BZVR/"
73            },
74            {
75                "category": "missing publication",
76                "detail": "In vitro system [IGVFSM2408BZVR](/in-vitro-systems/IGVFSM2408BZVR/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
77                "level": 30,
78                "level_name": "INTERNAL_ACTION",
79                "name": "audit_sample_missing_publication",
80                "path": "/in-vitro-systems/IGVFSM2408BZVR/"
81            },
82            {
83                "category": "mismatched status",
84                "detail": "Released in vitro system [IGVFSM6463YBYJ](/in-vitro-systems/IGVFSM6463YBYJ/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
85                "level": 30,
86                "level_name": "INTERNAL_ACTION",
87                "name": "audit_item_status",
88                "path": "/in-vitro-systems/IGVFSM6463YBYJ/"
89            },
90            {
91                "category": "missing publication",
92                "detail": "In vitro system [IGVFSM6463YBYJ](/in-vitro-systems/IGVFSM6463YBYJ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
93                "level": 30,
94                "level_name": "INTERNAL_ACTION",
95                "name": "audit_sample_missing_publication",
96                "path": "/in-vitro-systems/IGVFSM6463YBYJ/"
97            },
98            {
99                "category": "mismatched status",
100                "detail": "Released in vitro system [IGVFSM5175SJIS](/in-vitro-systems/IGVFSM5175SJIS/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
101                "level": 30,
102                "level_name": "INTERNAL_ACTION",
103                "name": "audit_item_status",
104                "path": "/in-vitro-systems/IGVFSM5175SJIS/"
105            },
106            {
107                "category": "missing publication",
108                "detail": "In vitro system [IGVFSM5175SJIS](/in-vitro-systems/IGVFSM5175SJIS/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
109                "level": 30,
110                "level_name": "INTERNAL_ACTION",
111                "name": "audit_sample_missing_publication",
112                "path": "/in-vitro-systems/IGVFSM5175SJIS/"
113            },
114            {
115                "category": "mismatched status",
116                "detail": "Released in vitro system [IGVFSM5627EEDY](/in-vitro-systems/IGVFSM5627EEDY/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
117                "level": 30,
118                "level_name": "INTERNAL_ACTION",
119                "name": "audit_item_status",
120                "path": "/in-vitro-systems/IGVFSM5627EEDY/"
121            },
122            {
123                "category": "missing publication",
124                "detail": "In vitro system [IGVFSM5627EEDY](/in-vitro-systems/IGVFSM5627EEDY/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
125                "level": 30,
126                "level_name": "INTERNAL_ACTION",
127                "name": "audit_sample_missing_publication",
128                "path": "/in-vitro-systems/IGVFSM5627EEDY/"
129            },
130            {
131                "category": "mismatched status",
132                "detail": "Released in vitro system [IGVFSM9365FWZA](/in-vitro-systems/IGVFSM9365FWZA/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
133                "level": 30,
134                "level_name": "INTERNAL_ACTION",
135                "name": "audit_item_status",
136                "path": "/in-vitro-systems/IGVFSM9365FWZA/"
137            },
138            {
139                "category": "missing publication",
140                "detail": "In vitro system [IGVFSM9365FWZA](/in-vitro-systems/IGVFSM9365FWZA/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
141                "level": 30,
142                "level_name": "INTERNAL_ACTION",
143                "name": "audit_sample_missing_publication",
144                "path": "/in-vitro-systems/IGVFSM9365FWZA/"
145            },
146            {
147                "category": "mismatched status",
148                "detail": "Released in vitro system [IGVFSM5332OJBP](/in-vitro-systems/IGVFSM5332OJBP/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
149                "level": 30,
150                "level_name": "INTERNAL_ACTION",
151                "name": "audit_item_status",
152                "path": "/in-vitro-systems/IGVFSM5332OJBP/"
153            },
154            {
155                "category": "missing publication",
156                "detail": "In vitro system [IGVFSM5332OJBP](/in-vitro-systems/IGVFSM5332OJBP/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
157                "level": 30,
158                "level_name": "INTERNAL_ACTION",
159                "name": "audit_sample_missing_publication",
160                "path": "/in-vitro-systems/IGVFSM5332OJBP/"
161            },
162            {
163                "category": "mismatched status",
164                "detail": "Released in vitro system [IGVFSM4599PEWQ](/in-vitro-systems/IGVFSM4599PEWQ/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
165                "level": 30,
166                "level_name": "INTERNAL_ACTION",
167                "name": "audit_item_status",
168                "path": "/in-vitro-systems/IGVFSM4599PEWQ/"
169            },
170            {
171                "category": "missing publication",
172                "detail": "In vitro system [IGVFSM4599PEWQ](/in-vitro-systems/IGVFSM4599PEWQ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
173                "level": 30,
174                "level_name": "INTERNAL_ACTION",
175                "name": "audit_sample_missing_publication",
176                "path": "/in-vitro-systems/IGVFSM4599PEWQ/"
177            },
178            {
179                "category": "missing publication",
180                "detail": "Analysis set [IGVFDS3423PSID](/analysis-sets/IGVFDS3423PSID/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
181                "level": 30,
182                "level_name": "INTERNAL_ACTION",
183                "name": "audit_file_set_missing_publication",
184                "path": "/analysis-sets/IGVFDS3423PSID/"
185            },
186            {
187                "category": "mismatched status",
188                "detail": "Released in vitro system [IGVFSM4073LMYD](/in-vitro-systems/IGVFSM4073LMYD/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
189                "level": 30,
190                "level_name": "INTERNAL_ACTION",
191                "name": "audit_item_status",
192                "path": "/in-vitro-systems/IGVFSM4073LMYD/"
193            },
194            {
195                "category": "missing publication",
196                "detail": "In vitro system [IGVFSM4073LMYD](/in-vitro-systems/IGVFSM4073LMYD/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
197                "level": 30,
198                "level_name": "INTERNAL_ACTION",
199                "name": "audit_sample_missing_publication",
200                "path": "/in-vitro-systems/IGVFSM4073LMYD/"
201            },
202            {
203                "category": "mismatched status",
204                "detail": "Released in vitro system [IGVFSM4125CFFV](/in-vitro-systems/IGVFSM4125CFFV/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
205                "level": 30,
206                "level_name": "INTERNAL_ACTION",
207                "name": "audit_item_status",
208                "path": "/in-vitro-systems/IGVFSM4125CFFV/"
209            },
210            {
211                "category": "missing publication",
212                "detail": "In vitro system [IGVFSM4125CFFV](/in-vitro-systems/IGVFSM4125CFFV/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
213                "level": 30,
214                "level_name": "INTERNAL_ACTION",
215                "name": "audit_sample_missing_publication",
216                "path": "/in-vitro-systems/IGVFSM4125CFFV/"
217            },
218            {
219                "category": "mismatched status",
220                "detail": "Released in vitro system [IGVFSM5844KEUJ](/in-vitro-systems/IGVFSM5844KEUJ/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
221                "level": 30,
222                "level_name": "INTERNAL_ACTION",
223                "name": "audit_item_status",
224                "path": "/in-vitro-systems/IGVFSM5844KEUJ/"
225            },
226            {
227                "category": "missing publication",
228                "detail": "In vitro system [IGVFSM5844KEUJ](/in-vitro-systems/IGVFSM5844KEUJ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
229                "level": 30,
230                "level_name": "INTERNAL_ACTION",
231                "name": "audit_sample_missing_publication",
232                "path": "/in-vitro-systems/IGVFSM5844KEUJ/"
233            },
234            {
235                "category": "mismatched status",
236                "detail": "Released in vitro system [IGVFSM0705YYHP](/in-vitro-systems/IGVFSM0705YYHP/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
237                "level": 30,
238                "level_name": "INTERNAL_ACTION",
239                "name": "audit_item_status",
240                "path": "/in-vitro-systems/IGVFSM0705YYHP/"
241            },
242            {
243                "category": "missing publication",
244                "detail": "In vitro system [IGVFSM0705YYHP](/in-vitro-systems/IGVFSM0705YYHP/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
245                "level": 30,
246                "level_name": "INTERNAL_ACTION",
247                "name": "audit_sample_missing_publication",
248                "path": "/in-vitro-systems/IGVFSM0705YYHP/"
249            },
250            {
251                "category": "mismatched status",
252                "detail": "Released in vitro system [IGVFSM4383GTZM](/in-vitro-systems/IGVFSM4383GTZM/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
253                "level": 30,
254                "level_name": "INTERNAL_ACTION",
255                "name": "audit_item_status",
256                "path": "/in-vitro-systems/IGVFSM4383GTZM/"
257            },
258            {
259                "category": "missing publication",
260                "detail": "In vitro system [IGVFSM4383GTZM](/in-vitro-systems/IGVFSM4383GTZM/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
261                "level": 30,
262                "level_name": "INTERNAL_ACTION",
263                "name": "audit_sample_missing_publication",
264                "path": "/in-vitro-systems/IGVFSM4383GTZM/"
265            },
266            {
267                "category": "mismatched status",
268                "detail": "Released in vitro system [IGVFSM4853BCZC](/in-vitro-systems/IGVFSM4853BCZC/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
269                "level": 30,
270                "level_name": "INTERNAL_ACTION",
271                "name": "audit_item_status",
272                "path": "/in-vitro-systems/IGVFSM4853BCZC/"
273            },
274            {
275                "category": "missing publication",
276                "detail": "In vitro system [IGVFSM4853BCZC](/in-vitro-systems/IGVFSM4853BCZC/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
277                "level": 30,
278                "level_name": "INTERNAL_ACTION",
279                "name": "audit_sample_missing_publication",
280                "path": "/in-vitro-systems/IGVFSM4853BCZC/"
281            },
282            {
283                "category": "missing publication",
284                "detail": "In vitro system [IGVFSM7075RRIN](/in-vitro-systems/IGVFSM7075RRIN/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
285                "level": 30,
286                "level_name": "INTERNAL_ACTION",
287                "name": "audit_sample_missing_publication",
288                "path": "/in-vitro-systems/IGVFSM7075RRIN/"
289            },
290            {
291                "category": "mismatched status",
292                "detail": "Released in vitro system [IGVFSM4588UXMN](/in-vitro-systems/IGVFSM4588UXMN/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
293                "level": 30,
294                "level_name": "INTERNAL_ACTION",
295                "name": "audit_item_status",
296                "path": "/in-vitro-systems/IGVFSM4588UXMN/"
297            },
298            {
299                "category": "missing publication",
300                "detail": "In vitro system [IGVFSM4588UXMN](/in-vitro-systems/IGVFSM4588UXMN/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
301                "level": 30,
302                "level_name": "INTERNAL_ACTION",
303                "name": "audit_sample_missing_publication",
304                "path": "/in-vitro-systems/IGVFSM4588UXMN/"
305            },
306            {
307                "category": "mismatched status",
308                "detail": "Released in vitro system [IGVFSM0996COAP](/in-vitro-systems/IGVFSM0996COAP/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
309                "level": 30,
310                "level_name": "INTERNAL_ACTION",
311                "name": "audit_item_status",
312                "path": "/in-vitro-systems/IGVFSM0996COAP/"
313            },
314            {
315                "category": "missing publication",
316                "detail": "In vitro system [IGVFSM0996COAP](/in-vitro-systems/IGVFSM0996COAP/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
317                "level": 30,
318                "level_name": "INTERNAL_ACTION",
319                "name": "audit_sample_missing_publication",
320                "path": "/in-vitro-systems/IGVFSM0996COAP/"
321            },
322            {
323                "category": "mismatched status",
324                "detail": "Released in vitro system [IGVFSM9715TWHE](/in-vitro-systems/IGVFSM9715TWHE/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
325                "level": 30,
326                "level_name": "INTERNAL_ACTION",
327                "name": "audit_item_status",
328                "path": "/in-vitro-systems/IGVFSM9715TWHE/"
329            },
330            {
331                "category": "missing publication",
332                "detail": "In vitro system [IGVFSM9715TWHE](/in-vitro-systems/IGVFSM9715TWHE/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
333                "level": 30,
334                "level_name": "INTERNAL_ACTION",
335                "name": "audit_sample_missing_publication",
336                "path": "/in-vitro-systems/IGVFSM9715TWHE/"
337            },
338            {
339                "category": "mismatched status",
340                "detail": "Released in vitro system [IGVFSM0805ZKDV](/in-vitro-systems/IGVFSM0805ZKDV/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
341                "level": 30,
342                "level_name": "INTERNAL_ACTION",
343                "name": "audit_item_status",
344                "path": "/in-vitro-systems/IGVFSM0805ZKDV/"
345            },
346            {
347                "category": "missing publication",
348                "detail": "In vitro system [IGVFSM0805ZKDV](/in-vitro-systems/IGVFSM0805ZKDV/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
349                "level": 30,
350                "level_name": "INTERNAL_ACTION",
351                "name": "audit_sample_missing_publication",
352                "path": "/in-vitro-systems/IGVFSM0805ZKDV/"
353            },
354            {
355                "category": "mismatched status",
356                "detail": "Released in vitro system [IGVFSM1854TJZA](/in-vitro-systems/IGVFSM1854TJZA/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
357                "level": 30,
358                "level_name": "INTERNAL_ACTION",
359                "name": "audit_item_status",
360                "path": "/in-vitro-systems/IGVFSM1854TJZA/"
361            },
362            {
363                "category": "missing publication",
364                "detail": "In vitro system [IGVFSM1854TJZA](/in-vitro-systems/IGVFSM1854TJZA/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
365                "level": 30,
366                "level_name": "INTERNAL_ACTION",
367                "name": "audit_sample_missing_publication",
368                "path": "/in-vitro-systems/IGVFSM1854TJZA/"
369            },
370            {
371                "category": "mismatched status",
372                "detail": "Released in vitro system [IGVFSM5940EPFP](/in-vitro-systems/IGVFSM5940EPFP/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
373                "level": 30,
374                "level_name": "INTERNAL_ACTION",
375                "name": "audit_item_status",
376                "path": "/in-vitro-systems/IGVFSM5940EPFP/"
377            },
378            {
379                "category": "missing publication",
380                "detail": "In vitro system [IGVFSM5940EPFP](/in-vitro-systems/IGVFSM5940EPFP/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
381                "level": 30,
382                "level_name": "INTERNAL_ACTION",
383                "name": "audit_sample_missing_publication",
384                "path": "/in-vitro-systems/IGVFSM5940EPFP/"
385            },
386            {
387                "category": "mismatched status",
388                "detail": "Released in vitro system [IGVFSM8031IIWI](/in-vitro-systems/IGVFSM8031IIWI/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
389                "level": 30,
390                "level_name": "INTERNAL_ACTION",
391                "name": "audit_item_status",
392                "path": "/in-vitro-systems/IGVFSM8031IIWI/"
393            },
394            {
395                "category": "missing publication",
396                "detail": "In vitro system [IGVFSM8031IIWI](/in-vitro-systems/IGVFSM8031IIWI/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
397                "level": 30,
398                "level_name": "INTERNAL_ACTION",
399                "name": "audit_sample_missing_publication",
400                "path": "/in-vitro-systems/IGVFSM8031IIWI/"
401            },
402            {
403                "category": "mismatched status",
404                "detail": "Released in vitro system [IGVFSM8306UJIK](/in-vitro-systems/IGVFSM8306UJIK/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
405                "level": 30,
406                "level_name": "INTERNAL_ACTION",
407                "name": "audit_item_status",
408                "path": "/in-vitro-systems/IGVFSM8306UJIK/"
409            },
410            {
411                "category": "missing publication",
412                "detail": "In vitro system [IGVFSM8306UJIK](/in-vitro-systems/IGVFSM8306UJIK/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
413                "level": 30,
414                "level_name": "INTERNAL_ACTION",
415                "name": "audit_sample_missing_publication",
416                "path": "/in-vitro-systems/IGVFSM8306UJIK/"
417            },
418            {
419                "category": "mismatched status",
420                "detail": "Released in vitro system [IGVFSM3818KKHR](/in-vitro-systems/IGVFSM3818KKHR/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
421                "level": 30,
422                "level_name": "INTERNAL_ACTION",
423                "name": "audit_item_status",
424                "path": "/in-vitro-systems/IGVFSM3818KKHR/"
425            },
426            {
427                "category": "missing publication",
428                "detail": "In vitro system [IGVFSM3818KKHR](/in-vitro-systems/IGVFSM3818KKHR/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
429                "level": 30,
430                "level_name": "INTERNAL_ACTION",
431                "name": "audit_sample_missing_publication",
432                "path": "/in-vitro-systems/IGVFSM3818KKHR/"
433            },
434            {
435                "category": "mismatched status",
436                "detail": "Released in vitro system [IGVFSM6259GNEC](/in-vitro-systems/IGVFSM6259GNEC/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
437                "level": 30,
438                "level_name": "INTERNAL_ACTION",
439                "name": "audit_item_status",
440                "path": "/in-vitro-systems/IGVFSM6259GNEC/"
441            },
442            {
443                "category": "missing publication",
444                "detail": "In vitro system [IGVFSM6259GNEC](/in-vitro-systems/IGVFSM6259GNEC/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
445                "level": 30,
446                "level_name": "INTERNAL_ACTION",
447                "name": "audit_sample_missing_publication",
448                "path": "/in-vitro-systems/IGVFSM6259GNEC/"
449            },
450            {
451                "category": "mismatched status",
452                "detail": "Released in vitro system [IGVFSM3965ATNS](/in-vitro-systems/IGVFSM3965ATNS/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
453                "level": 30,
454                "level_name": "INTERNAL_ACTION",
455                "name": "audit_item_status",
456                "path": "/in-vitro-systems/IGVFSM3965ATNS/"
457            },
458            {
459                "category": "missing publication",
460                "detail": "In vitro system [IGVFSM3965ATNS](/in-vitro-systems/IGVFSM3965ATNS/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
461                "level": 30,
462                "level_name": "INTERNAL_ACTION",
463                "name": "audit_sample_missing_publication",
464                "path": "/in-vitro-systems/IGVFSM3965ATNS/"
465            },
466            {
467                "category": "mismatched status",
468                "detail": "Released in vitro system [IGVFSM8901HJRO](/in-vitro-systems/IGVFSM8901HJRO/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
469                "level": 30,
470                "level_name": "INTERNAL_ACTION",
471                "name": "audit_item_status",
472                "path": "/in-vitro-systems/IGVFSM8901HJRO/"
473            },
474            {
475                "category": "missing publication",
476                "detail": "In vitro system [IGVFSM8901HJRO](/in-vitro-systems/IGVFSM8901HJRO/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
477                "level": 30,
478                "level_name": "INTERNAL_ACTION",
479                "name": "audit_sample_missing_publication",
480                "path": "/in-vitro-systems/IGVFSM8901HJRO/"
481            },
482            {
483                "category": "mismatched status",
484                "detail": "Released in vitro system [IGVFSM7954ICIY](/in-vitro-systems/IGVFSM7954ICIY/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
485                "level": 30,
486                "level_name": "INTERNAL_ACTION",
487                "name": "audit_item_status",
488                "path": "/in-vitro-systems/IGVFSM7954ICIY/"
489            },
490            {
491                "category": "missing publication",
492                "detail": "In vitro system [IGVFSM7954ICIY](/in-vitro-systems/IGVFSM7954ICIY/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
493                "level": 30,
494                "level_name": "INTERNAL_ACTION",
495                "name": "audit_sample_missing_publication",
496                "path": "/in-vitro-systems/IGVFSM7954ICIY/"
497            },
498            {
499                "category": "mismatched status",
500                "detail": "Released in vitro system [IGVFSM6349GRPM](/in-vitro-systems/IGVFSM6349GRPM/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
501                "level": 30,
502                "level_name": "INTERNAL_ACTION",
503                "name": "audit_item_status",
504                "path": "/in-vitro-systems/IGVFSM6349GRPM/"
505            },
506            {
507                "category": "missing publication",
508                "detail": "In vitro system [IGVFSM6349GRPM](/in-vitro-systems/IGVFSM6349GRPM/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
509                "level": 30,
510                "level_name": "INTERNAL_ACTION",
511                "name": "audit_sample_missing_publication",
512                "path": "/in-vitro-systems/IGVFSM6349GRPM/"
513            },
514            {
515                "category": "mismatched status",
516                "detail": "Released in vitro system [IGVFSM6276DPKS](/in-vitro-systems/IGVFSM6276DPKS/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
517                "level": 30,
518                "level_name": "INTERNAL_ACTION",
519                "name": "audit_item_status",
520                "path": "/in-vitro-systems/IGVFSM6276DPKS/"
521            },
522            {
523                "category": "missing publication",
524                "detail": "In vitro system [IGVFSM6276DPKS](/in-vitro-systems/IGVFSM6276DPKS/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
525                "level": 30,
526                "level_name": "INTERNAL_ACTION",
527                "name": "audit_sample_missing_publication",
528                "path": "/in-vitro-systems/IGVFSM6276DPKS/"
529            },
530            {
531                "category": "mismatched status",
532                "detail": "Released in vitro system [IGVFSM3394FCPH](/in-vitro-systems/IGVFSM3394FCPH/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
533                "level": 30,
534                "level_name": "INTERNAL_ACTION",
535                "name": "audit_item_status",
536                "path": "/in-vitro-systems/IGVFSM3394FCPH/"
537            },
538            {
539                "category": "missing publication",
540                "detail": "In vitro system [IGVFSM3394FCPH](/in-vitro-systems/IGVFSM3394FCPH/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
541                "level": 30,
542                "level_name": "INTERNAL_ACTION",
543                "name": "audit_sample_missing_publication",
544                "path": "/in-vitro-systems/IGVFSM3394FCPH/"
545            },
546            {
547                "category": "mismatched status",
548                "detail": "Released in vitro system [IGVFSM1276SAGC](/in-vitro-systems/IGVFSM1276SAGC/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
549                "level": 30,
550                "level_name": "INTERNAL_ACTION",
551                "name": "audit_item_status",
552                "path": "/in-vitro-systems/IGVFSM1276SAGC/"
553            },
554            {
555                "category": "missing publication",
556                "detail": "In vitro system [IGVFSM1276SAGC](/in-vitro-systems/IGVFSM1276SAGC/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
557                "level": 30,
558                "level_name": "INTERNAL_ACTION",
559                "name": "audit_sample_missing_publication",
560                "path": "/in-vitro-systems/IGVFSM1276SAGC/"
561            },
562            {
563                "category": "mismatched status",
564                "detail": "Released in vitro system [IGVFSM2674RBOA](/in-vitro-systems/IGVFSM2674RBOA/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
565                "level": 30,
566                "level_name": "INTERNAL_ACTION",
567                "name": "audit_item_status",
568                "path": "/in-vitro-systems/IGVFSM2674RBOA/"
569            },
570            {
571                "category": "missing publication",
572                "detail": "In vitro system [IGVFSM2674RBOA](/in-vitro-systems/IGVFSM2674RBOA/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
573                "level": 30,
574                "level_name": "INTERNAL_ACTION",
575                "name": "audit_sample_missing_publication",
576                "path": "/in-vitro-systems/IGVFSM2674RBOA/"
577            },
578            {
579                "category": "mismatched status",
580                "detail": "Released in vitro system [IGVFSM8427KPPU](/in-vitro-systems/IGVFSM8427KPPU/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
581                "level": 30,
582                "level_name": "INTERNAL_ACTION",
583                "name": "audit_item_status",
584                "path": "/in-vitro-systems/IGVFSM8427KPPU/"
585            },
586            {
587                "category": "missing publication",
588                "detail": "In vitro system [IGVFSM8427KPPU](/in-vitro-systems/IGVFSM8427KPPU/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
589                "level": 30,
590                "level_name": "INTERNAL_ACTION",
591                "name": "audit_sample_missing_publication",
592                "path": "/in-vitro-systems/IGVFSM8427KPPU/"
593            },
594            {
595                "category": "mismatched status",
596                "detail": "Released in vitro system [IGVFSM4195NXPO](/in-vitro-systems/IGVFSM4195NXPO/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
597                "level": 30,
598                "level_name": "INTERNAL_ACTION",
599                "name": "audit_item_status",
600                "path": "/in-vitro-systems/IGVFSM4195NXPO/"
601            },
602            {
603                "category": "missing publication",
604                "detail": "In vitro system [IGVFSM4195NXPO](/in-vitro-systems/IGVFSM4195NXPO/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
605                "level": 30,
606                "level_name": "INTERNAL_ACTION",
607                "name": "audit_sample_missing_publication",
608                "path": "/in-vitro-systems/IGVFSM4195NXPO/"
609            },
610            {
611                "category": "mismatched status",
612                "detail": "Released in vitro system [IGVFSM6465SGTZ](/in-vitro-systems/IGVFSM6465SGTZ/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
613                "level": 30,
614                "level_name": "INTERNAL_ACTION",
615                "name": "audit_item_status",
616                "path": "/in-vitro-systems/IGVFSM6465SGTZ/"
617            },
618            {
619                "category": "missing publication",
620                "detail": "In vitro system [IGVFSM6465SGTZ](/in-vitro-systems/IGVFSM6465SGTZ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
621                "level": 30,
622                "level_name": "INTERNAL_ACTION",
623                "name": "audit_sample_missing_publication",
624                "path": "/in-vitro-systems/IGVFSM6465SGTZ/"
625            },
626            {
627                "category": "mismatched status",
628                "detail": "Released in vitro system [IGVFSM3986RDKP](/in-vitro-systems/IGVFSM3986RDKP/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
629                "level": 30,
630                "level_name": "INTERNAL_ACTION",
631                "name": "audit_item_status",
632                "path": "/in-vitro-systems/IGVFSM3986RDKP/"
633            },
634            {
635                "category": "missing publication",
636                "detail": "In vitro system [IGVFSM3986RDKP](/in-vitro-systems/IGVFSM3986RDKP/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
637                "level": 30,
638                "level_name": "INTERNAL_ACTION",
639                "name": "audit_sample_missing_publication",
640                "path": "/in-vitro-systems/IGVFSM3986RDKP/"
641            },
642            {
643                "category": "mismatched status",
644                "detail": "Released in vitro system [IGVFSM0143XZGF](/in-vitro-systems/IGVFSM0143XZGF/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
645                "level": 30,
646                "level_name": "INTERNAL_ACTION",
647                "name": "audit_item_status",
648                "path": "/in-vitro-systems/IGVFSM0143XZGF/"
649            },
650            {
651                "category": "missing publication",
652                "detail": "In vitro system [IGVFSM0143XZGF](/in-vitro-systems/IGVFSM0143XZGF/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
653                "level": 30,
654                "level_name": "INTERNAL_ACTION",
655                "name": "audit_sample_missing_publication",
656                "path": "/in-vitro-systems/IGVFSM0143XZGF/"
657            },
658            {
659                "category": "mismatched status",
660                "detail": "Released in vitro system [IGVFSM9821NUGZ](/in-vitro-systems/IGVFSM9821NUGZ/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
661                "level": 30,
662                "level_name": "INTERNAL_ACTION",
663                "name": "audit_item_status",
664                "path": "/in-vitro-systems/IGVFSM9821NUGZ/"
665            },
666            {
667                "category": "missing publication",
668                "detail": "In vitro system [IGVFSM9821NUGZ](/in-vitro-systems/IGVFSM9821NUGZ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
669                "level": 30,
670                "level_name": "INTERNAL_ACTION",
671                "name": "audit_sample_missing_publication",
672                "path": "/in-vitro-systems/IGVFSM9821NUGZ/"
673            }
674        ]
675    },
676    "award": {
677        "@id": "/awards/HG011972/",
678        "component": "functional characterization",
679        "contact_pi": {
680            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
681            "title": "Jesse Engreitz"
682        },
683        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
684    },
685    "construct_library_sets": [
686        {
687            "@id": "/construct-library-sets/IGVFDS6982DESN/",
688            "accession": "IGVFDS6982DESN",
689            "file_set_type": "guide library",
690            "status": "in progress",
691            "summary": "guide (sgRNA) library targeting sequence variants in a genomic locus"
692        }
693    ],
694    "control_for": [],
695    "creation_timestamp": "2023-12-16T21:03:04.590525+00:00",
696    "data_use_limitation_summaries": [
697        "no certificate"
698    ],
699    "description": "Analysis of PPIF promoter 5-bp tiling mutagenesis edit effects on PPIF expression that were measured by Variant-FlowFISH in THP-1 cells.",
700    "donors": [
701        {
702            "@id": "/human-donors/IGVFDO7359LVPI/",
703            "accession": "IGVFDO7359LVPI",
704            "aliases": [
705                "igvf:donor_of_THP1"
706            ],
707            "sex": "male",
708            "status": "released",
709            "taxa": "Homo sapiens"
710        }
711    ],
712    "file_set_type": "principal analysis",
713    "files": [
714        {
715            "@id": "/tabular-files/IGVFFI1480MKHV/",
716            "accession": "IGVFFI1480MKHV",
717            "aliases": [
718                "jesse-engreitz:PPIF_promoter_tiling_THP1_Variant-FlowFISH_variant_effects_file"
719            ],
720            "assembly": "hg19",
721            "content_type": "variant effects",
722            "controlled_access": false,
723            "creation_timestamp": "2024-09-14T02:29:22.563925+00:00",
724            "derived_from": [
725                "/sequence-files/IGVFFI1227JYHU/",
726                "/sequence-files/IGVFFI0602HGYD/",
727                "/sequence-files/IGVFFI3716GUMG/",
728                "/sequence-files/IGVFFI3034OZUL/",
729                "/sequence-files/IGVFFI7325CDOX/",
730                "/sequence-files/IGVFFI2191QBIE/",
731                "/sequence-files/IGVFFI8321VUAU/",
732                "/sequence-files/IGVFFI4288XHUX/",
733                "/sequence-files/IGVFFI3808JEKJ/",
734                "/sequence-files/IGVFFI7789LABZ/",
735                "/sequence-files/IGVFFI3933SRWS/",
736                "/sequence-files/IGVFFI1576FWBE/",
737                "/sequence-files/IGVFFI6197DOEG/",
738                "/sequence-files/IGVFFI4927AFPV/",
739                "/sequence-files/IGVFFI9943RVHV/",
740                "/sequence-files/IGVFFI6602JMCV/",
741                "/sequence-files/IGVFFI0030DFFN/",
742                "/sequence-files/IGVFFI9423LSSX/",
743                "/sequence-files/IGVFFI1189WLQL/",
744                "/sequence-files/IGVFFI7066PBGZ/",
745                "/sequence-files/IGVFFI5556XSRH/",
746                "/sequence-files/IGVFFI6629JRKX/",
747                "/sequence-files/IGVFFI1631MQVE/",
748                "/sequence-files/IGVFFI5479QUYU/",
749                "/sequence-files/IGVFFI5561PSUU/",
750                "/sequence-files/IGVFFI8119ONEN/",
751                "/sequence-files/IGVFFI7985BQOY/",
752                "/sequence-files/IGVFFI7638KMFR/",
753                "/sequence-files/IGVFFI1570DCMH/",
754                "/sequence-files/IGVFFI5947BHMQ/",
755                "/sequence-files/IGVFFI3204GLEE/",
756                "/sequence-files/IGVFFI3036CLFS/",
757                "/sequence-files/IGVFFI9131RVAG/",
758                "/sequence-files/IGVFFI1753ZLCW/",
759                "/sequence-files/IGVFFI9671KRGE/",
760                "/sequence-files/IGVFFI6139RPXV/",
761                "/sequence-files/IGVFFI3305YTLT/",
762                "/sequence-files/IGVFFI1594NIRL/",
763                "/sequence-files/IGVFFI1141WNOY/",
764                "/sequence-files/IGVFFI9286GTIB/",
765                "/sequence-files/IGVFFI9445WTGW/",
766                "/sequence-files/IGVFFI7273GVPE/",
767                "/sequence-files/IGVFFI7031FDMM/",
768                "/sequence-files/IGVFFI3165SCCW/",
769                "/sequence-files/IGVFFI2098VOKP/",
770                "/sequence-files/IGVFFI4643VBFT/",
771                "/sequence-files/IGVFFI7713CYYJ/",
772                "/sequence-files/IGVFFI7231YZOX/",
773                "/sequence-files/IGVFFI4412DUVM/",
774                "/sequence-files/IGVFFI1734UVGN/",
775                "/sequence-files/IGVFFI4255BOQT/",
776                "/sequence-files/IGVFFI0907ZWJA/",
777                "/sequence-files/IGVFFI0364LFKW/",
778                "/sequence-files/IGVFFI4087ETZU/",
779                "/sequence-files/IGVFFI3884VSEE/",
780                "/sequence-files/IGVFFI3347KXEY/",
781                "/sequence-files/IGVFFI5420BKIH/",
782                "/sequence-files/IGVFFI1460FTAQ/",
783                "/sequence-files/IGVFFI5732LFOM/",
784                "/sequence-files/IGVFFI7403XIFD/",
785                "/sequence-files/IGVFFI8939NFZP/",
786                "/sequence-files/IGVFFI7220VRID/",
787                "/sequence-files/IGVFFI8442HSTB/",
788                "/sequence-files/IGVFFI7741FPFD/",
789                "/sequence-files/IGVFFI6612UUQX/",
790                "/sequence-files/IGVFFI7535LUPR/",
791                "/sequence-files/IGVFFI8329JUDP/",
792                "/sequence-files/IGVFFI5704YKDN/",
793                "/sequence-files/IGVFFI6450YVDW/",
794                "/sequence-files/IGVFFI0076LJCM/",
795                "/sequence-files/IGVFFI6500PNHB/",
796                "/sequence-files/IGVFFI3264AYEC/",
797                "/sequence-files/IGVFFI6996RKXA/",
798                "/sequence-files/IGVFFI4464KQXE/",
799                "/sequence-files/IGVFFI5684RBSI/",
800                "/sequence-files/IGVFFI6877SHQZ/",
801                "/sequence-files/IGVFFI6654QBXZ/",
802                "/sequence-files/IGVFFI9351KNCA/",
803                "/sequence-files/IGVFFI8756MZBS/",
804                "/sequence-files/IGVFFI2053LDLS/",
805                "/sequence-files/IGVFFI6333QPRB/",
806                "/sequence-files/IGVFFI3974SGHM/",
807                "/sequence-files/IGVFFI9073XHJX/",
808                "/sequence-files/IGVFFI5127LIBU/",
809                "/sequence-files/IGVFFI5303CSNX/",
810                "/sequence-files/IGVFFI6887FGIT/",
811                "/sequence-files/IGVFFI3386QWDP/",
812                "/sequence-files/IGVFFI7755FBJT/",
813                "/sequence-files/IGVFFI2577RHWX/",
814                "/sequence-files/IGVFFI9264WGJU/",
815                "/sequence-files/IGVFFI3577PBXF/",
816                "/sequence-files/IGVFFI0883TTOY/",
817                "/sequence-files/IGVFFI2030NNQS/",
818                "/sequence-files/IGVFFI6586LZKE/",
819                "/sequence-files/IGVFFI8573PPSH/",
820                "/sequence-files/IGVFFI2069SDFI/",
821                "/sequence-files/IGVFFI7288RHAC/",
822                "/sequence-files/IGVFFI9145VWFH/",
823                "/sequence-files/IGVFFI7222GUQL/",
824                "/sequence-files/IGVFFI5738NELW/",
825                "/sequence-files/IGVFFI9446ESYL/",
826                "/sequence-files/IGVFFI0691XYCV/",
827                "/sequence-files/IGVFFI4580NPDH/",
828                "/sequence-files/IGVFFI4636EYRQ/",
829                "/sequence-files/IGVFFI3064NXHF/",
830                "/sequence-files/IGVFFI2567SKQO/",
831                "/sequence-files/IGVFFI8171HKOX/",
832                "/sequence-files/IGVFFI4128OIER/",
833                "/sequence-files/IGVFFI5457XBYW/",
834                "/sequence-files/IGVFFI8017PIDE/",
835                "/sequence-files/IGVFFI8096XEZU/",
836                "/sequence-files/IGVFFI3188XFOG/",
837                "/sequence-files/IGVFFI1964NANB/",
838                "/sequence-files/IGVFFI7447ZCKH/",
839                "/sequence-files/IGVFFI5769PIFS/",
840                "/sequence-files/IGVFFI3349QITO/",
841                "/sequence-files/IGVFFI4926UHVI/",
842                "/sequence-files/IGVFFI8196QMNK/",
843                "/sequence-files/IGVFFI7813JIXI/",
844                "/sequence-files/IGVFFI3274PAGO/",
845                "/sequence-files/IGVFFI5216WVFP/",
846                "/sequence-files/IGVFFI7657MMEG/",
847                "/sequence-files/IGVFFI9425TYGB/",
848                "/sequence-files/IGVFFI0079OOSX/",
849                "/sequence-files/IGVFFI4041WICZ/",
850                "/sequence-files/IGVFFI8986KVVP/",
851                "/sequence-files/IGVFFI5133ZEUC/",
852                "/sequence-files/IGVFFI1965IKSP/",
853                "/sequence-files/IGVFFI1020MFXK/",
854                "/sequence-files/IGVFFI9831XTKC/",
855                "/sequence-files/IGVFFI2416XAJS/",
856                "/sequence-files/IGVFFI9005AXVA/",
857                "/sequence-files/IGVFFI5061ILNK/",
858                "/sequence-files/IGVFFI1327TXKF/",
859                "/sequence-files/IGVFFI2667KWPV/",
860                "/sequence-files/IGVFFI1212NLVW/",
861                "/sequence-files/IGVFFI6721SIJR/",
862                "/sequence-files/IGVFFI3122LZPJ/",
863                "/sequence-files/IGVFFI7531RCDN/",
864                "/sequence-files/IGVFFI3545AWIK/",
865                "/sequence-files/IGVFFI8009SKVK/",
866                "/sequence-files/IGVFFI3536XWTA/",
867                "/sequence-files/IGVFFI6018TTVV/",
868                "/sequence-files/IGVFFI5932XHJR/",
869                "/sequence-files/IGVFFI2901MSWB/",
870                "/sequence-files/IGVFFI5738GCOE/",
871                "/sequence-files/IGVFFI5264KOJB/",
872                "/sequence-files/IGVFFI7478BMNB/",
873                "/sequence-files/IGVFFI6767GQPX/",
874                "/sequence-files/IGVFFI8285QUQB/",
875                "/sequence-files/IGVFFI4202ZWWK/",
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1214                "/sequence-files/IGVFFI0864LZHT/",
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1221                "/sequence-files/IGVFFI9227SRQG/",
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1223                "/sequence-files/IGVFFI1682NDCW/",
1224                "/sequence-files/IGVFFI1568GETW/",
1225                "/sequence-files/IGVFFI0930OWAT/",
1226                "/sequence-files/IGVFFI4733DDYX/",
1227                "/sequence-files/IGVFFI0134RFFN/",
1228                "/sequence-files/IGVFFI8086IBDD/",
1229                "/sequence-files/IGVFFI1625KPDG/",
1230                "/sequence-files/IGVFFI3024EVGP/",
1231                "/sequence-files/IGVFFI2862QDNP/",
1232                "/sequence-files/IGVFFI5535YYAZ/",
1233                "/sequence-files/IGVFFI0431VFNT/",
1234                "/sequence-files/IGVFFI9816MGJM/",
1235                "/sequence-files/IGVFFI7969QSXA/",
1236                "/sequence-files/IGVFFI0697CAND/",
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1244                "/sequence-files/IGVFFI5622BSAS/",
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1248                "/sequence-files/IGVFFI4965TODK/",
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1251                "/sequence-files/IGVFFI6289UNNG/",
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1254                "/sequence-files/IGVFFI3813AYUH/",
1255                "/sequence-files/IGVFFI8451XSWN/",
1256                "/sequence-files/IGVFFI9301NLCR/",
1257                "/sequence-files/IGVFFI0734CVAR/",
1258                "/sequence-files/IGVFFI7663VGRF/",
1259                "/sequence-files/IGVFFI0377DUPL/",
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1987                "/sequence-files/IGVFFI6421DUIN/",
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1992                "/sequence-files/IGVFFI9938QWWM/",
1993                "/sequence-files/IGVFFI2164BSLS/",
1994                "/sequence-files/IGVFFI9792LJET/",
1995                "/sequence-files/IGVFFI0849TYIU/",
1996                "/sequence-files/IGVFFI6449QZQS/",
1997                "/sequence-files/IGVFFI1324VPBT/",
1998                "/sequence-files/IGVFFI7722NGHW/",
1999                "/sequence-files/IGVFFI6849EKQE/",
2000                "/sequence-files/IGVFFI8900KHJR/",
2001                "/sequence-files/IGVFFI6064CFCZ/",
2002                "/sequence-files/IGVFFI2751SFWM/",
2003                "/sequence-files/IGVFFI8382VXTU/",
2004                "/sequence-files/IGVFFI9794IIIZ/",
2005                "/sequence-files/IGVFFI3995QWEQ/",
2006                "/sequence-files/IGVFFI4353ADRG/",
2007                "/sequence-files/IGVFFI8765BEHK/",
2008                "/sequence-files/IGVFFI9043GWJF/",
2009                "/sequence-files/IGVFFI9019KSGN/",
2010                "/sequence-files/IGVFFI7224DCNP/",
2011                "/sequence-files/IGVFFI6394HZYT/",
2012                "/sequence-files/IGVFFI8886MCBY/",
2013                "/sequence-files/IGVFFI4121DCCA/",
2014                "/sequence-files/IGVFFI4091QUCN/",
2015                "/sequence-files/IGVFFI8736TVDQ/",
2016                "/sequence-files/IGVFFI9371CZGA/",
2017                "/sequence-files/IGVFFI9021CNLQ/",
2018                "/sequence-files/IGVFFI3363HDKQ/",
2019                "/sequence-files/IGVFFI8666HUSZ/",
2020                "/sequence-files/IGVFFI4325RPSE/",
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2476        {
2477            "@id": "/measurement-sets/IGVFDS8356GTHO/",
2478            "accession": "IGVFDS8356GTHO",
2479            "aliases": [
2480                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-BinD_AmpliconSequencing"
2481            ],
2482            "file_set_type": "experimental data",
2483            "status": "released"
2484        },
2485        {
2486            "@id": "/measurement-sets/IGVFDS5864UGFT/",
2487            "accession": "IGVFDS5864UGFT",
2488            "aliases": [
2489                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-THP1-PE2_Exp2_NegControl_AmpliconSequencing"
2490            ],
2491            "file_set_type": "experimental data",
2492            "status": "released"
2493        },
2494        {
2495            "@id": "/measurement-sets/IGVFDS8290UELV/",
2496            "accession": "IGVFDS8290UELV",
2497            "aliases": [
2498                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinA_AmpliconSequencing"
2499            ],
2500            "file_set_type": "experimental data",
2501            "status": "released"
2502        },
2503        {
2504            "@id": "/measurement-sets/IGVFDS4745BLLN/",
2505            "accession": "IGVFDS4745BLLN",
2506            "aliases": [
2507                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-FACS_Input_AmpliconSequencing"
2508            ],
2509            "file_set_type": "experimental data",
2510            "status": "released"
2511        },
2512        {
2513            "@id": "/measurement-sets/IGVFDS8801DBGC/",
2514            "accession": "IGVFDS8801DBGC",
2515            "aliases": [
2516                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinB_AmpliconSequencing"
2517            ],
2518            "file_set_type": "experimental data",
2519            "status": "released"
2520        },
2521        {
2522            "@id": "/measurement-sets/IGVFDS7403HHLV/",
2523            "accession": "IGVFDS7403HHLV",
2524            "aliases": [
2525                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinC_AmpliconSequencing"
2526            ],
2527            "file_set_type": "experimental data",
2528            "status": "released"
2529        },
2530        {
2531            "@id": "/measurement-sets/IGVFDS9084GQXI/",
2532            "accession": "IGVFDS9084GQXI",
2533            "aliases": [
2534                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinD_AmpliconSequencing"
2535            ],
2536            "file_set_type": "experimental data",
2537            "status": "released"
2538        },
2539        {
2540            "@id": "/measurement-sets/IGVFDS6551IWAB/",
2541            "accession": "IGVFDS6551IWAB",
2542            "aliases": [
2543                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinA_AmpliconSequencing"
2544            ],
2545            "file_set_type": "experimental data",
2546            "status": "released"
2547        },
2548        {
2549            "@id": "/measurement-sets/IGVFDS5733FUWG/",
2550            "accession": "IGVFDS5733FUWG",
2551            "aliases": [
2552                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-FACS_Input_AmpliconSequencing"
2553            ],
2554            "file_set_type": "experimental data",
2555            "status": "released"
2556        },
2557        {
2558            "@id": "/measurement-sets/IGVFDS6761PEJX/",
2559            "accession": "IGVFDS6761PEJX",
2560            "aliases": [
2561                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinB_AmpliconSequencing"
2562            ],
2563            "file_set_type": "experimental data",
2564            "status": "released"
2565        },
2566        {
2567            "@id": "/measurement-sets/IGVFDS9894YFSM/",
2568            "accession": "IGVFDS9894YFSM",
2569            "aliases": [
2570                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinC_AmpliconSequencing"
2571            ],
2572            "file_set_type": "experimental data",
2573            "status": "released"
2574        },
2575        {
2576            "@id": "/measurement-sets/IGVFDS3226EEYN/",
2577            "accession": "IGVFDS3226EEYN",
2578            "aliases": [
2579                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinD_AmpliconSequencing"
2580            ],
2581            "file_set_type": "experimental data",
2582            "status": "released"
2583        },
2584        {
2585            "@id": "/measurement-sets/IGVFDS4761PXVO/",
2586            "accession": "IGVFDS4761PXVO",
2587            "aliases": [
2588                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinA_AmpliconSequencing"
2589            ],
2590            "file_set_type": "experimental data",
2591            "status": "released"
2592        },
2593        {
2594            "@id": "/measurement-sets/IGVFDS0336ABEV/",
2595            "accession": "IGVFDS0336ABEV",
2596            "aliases": [
2597                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input_AmpliconSequencing"
2598            ],
2599            "file_set_type": "experimental data",
2600            "status": "released"
2601        },
2602        {
2603            "@id": "/measurement-sets/IGVFDS1646OXQU/",
2604            "accession": "IGVFDS1646OXQU",
2605            "aliases": [
2606                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinB_AmpliconSequencing"
2607            ],
2608            "file_set_type": "experimental data",
2609            "status": "released"
2610        },
2611        {
2612            "@id": "/measurement-sets/IGVFDS9665GYVE/",
2613            "accession": "IGVFDS9665GYVE",
2614            "aliases": [
2615                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinC_AmpliconSequencing"
2616            ],
2617            "file_set_type": "experimental data",
2618            "status": "released"
2619        },
2620        {
2621            "@id": "/measurement-sets/IGVFDS8854UNCC/",
2622            "accession": "IGVFDS8854UNCC",
2623            "aliases": [
2624                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinD_AmpliconSequencing"
2625            ],
2626            "file_set_type": "experimental data",
2627            "status": "released"
2628        },
2629        {
2630            "@id": "/measurement-sets/IGVFDS6512WYQI/",
2631            "accession": "IGVFDS6512WYQI",
2632            "aliases": [
2633                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-BinA_AmpliconSequencing"
2634            ],
2635            "file_set_type": "experimental data",
2636            "status": "released"
2637        },
2638        {
2639            "@id": "/measurement-sets/IGVFDS6147NJBC/",
2640            "accession": "IGVFDS6147NJBC",
2641            "aliases": [
2642                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-FACS_Input_AmpliconSequencing"
2643            ],
2644            "file_set_type": "experimental data",
2645            "status": "released"
2646        },
2647        {
2648            "@id": "/measurement-sets/IGVFDS6622DPIT/",
2649            "accession": "IGVFDS6622DPIT",
2650            "aliases": [
2651                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-BinB_AmpliconSequencing"
2652            ],
2653            "file_set_type": "experimental data",
2654            "status": "released"
2655        },
2656        {
2657            "@id": "/measurement-sets/IGVFDS6566NSFE/",
2658            "accession": "IGVFDS6566NSFE",
2659            "aliases": [
2660                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-BinC_AmpliconSequencing"
2661            ],
2662            "file_set_type": "experimental data",
2663            "status": "released"
2664        },
2665        {
2666            "@id": "/measurement-sets/IGVFDS4761MJPK/",
2667            "accession": "IGVFDS4761MJPK",
2668            "aliases": [
2669                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-BinD_AmpliconSequencing"
2670            ],
2671            "file_set_type": "experimental data",
2672            "status": "released"
2673        },
2674        {
2675            "@id": "/measurement-sets/IGVFDS7009ITAD/",
2676            "accession": "IGVFDS7009ITAD",
2677            "aliases": [
2678                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinA_AmpliconSequencing"
2679            ],
2680            "file_set_type": "experimental data",
2681            "status": "released"
2682        },
2683        {
2684            "@id": "/measurement-sets/IGVFDS8631OYNB/",
2685            "accession": "IGVFDS8631OYNB",
2686            "aliases": [
2687                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-FACS_Input_AmpliconSequencing"
2688            ],
2689            "file_set_type": "experimental data",
2690            "status": "released"
2691        },
2692        {
2693            "@id": "/measurement-sets/IGVFDS1674OUCP/",
2694            "accession": "IGVFDS1674OUCP",
2695            "aliases": [
2696                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinB_AmpliconSequencing"
2697            ],
2698            "file_set_type": "experimental data",
2699            "status": "released"
2700        },
2701        {
2702            "@id": "/measurement-sets/IGVFDS8517SHZG/",
2703            "accession": "IGVFDS8517SHZG",
2704            "aliases": [
2705                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinC_AmpliconSequencing"
2706            ],
2707            "file_set_type": "experimental data",
2708            "status": "released"
2709        },
2710        {
2711            "@id": "/measurement-sets/IGVFDS4750CFGI/",
2712            "accession": "IGVFDS4750CFGI",
2713            "aliases": [
2714                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinD_AmpliconSequencing"
2715            ],
2716            "file_set_type": "experimental data",
2717            "status": "released"
2718        },
2719        {
2720            "@id": "/measurement-sets/IGVFDS1327XCCU/",
2721            "accession": "IGVFDS1327XCCU",
2722            "aliases": [
2723                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinA_AmpliconSequencing"
2724            ],
2725            "file_set_type": "experimental data",
2726            "status": "released"
2727        },
2728        {
2729            "@id": "/measurement-sets/IGVFDS3537WUVG/",
2730            "accession": "IGVFDS3537WUVG",
2731            "aliases": [
2732                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-FACS_Input_AmpliconSequencing"
2733            ],
2734            "file_set_type": "experimental data",
2735            "status": "released"
2736        },
2737        {
2738            "@id": "/measurement-sets/IGVFDS1783OBDQ/",
2739            "accession": "IGVFDS1783OBDQ",
2740            "aliases": [
2741                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinB_AmpliconSequencing"
2742            ],
2743            "file_set_type": "experimental data",
2744            "status": "released"
2745        },
2746        {
2747            "@id": "/measurement-sets/IGVFDS8736JDCM/",
2748            "accession": "IGVFDS8736JDCM",
2749            "aliases": [
2750                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinC_AmpliconSequencing"
2751            ],
2752            "file_set_type": "experimental data",
2753            "status": "released"
2754        },
2755        {
2756            "@id": "/measurement-sets/IGVFDS6267YRNH/",
2757            "accession": "IGVFDS6267YRNH",
2758            "aliases": [
2759                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinD_AmpliconSequencing"
2760            ],
2761            "file_set_type": "experimental data",
2762            "status": "released"
2763        },
2764        {
2765            "@id": "/measurement-sets/IGVFDS0744DITV/",
2766            "accession": "IGVFDS0744DITV",
2767            "aliases": [
2768                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinA_AmpliconSequencing"
2769            ],
2770            "file_set_type": "experimental data",
2771            "status": "released"
2772        },
2773        {
2774            "@id": "/measurement-sets/IGVFDS0629YEMD/",
2775            "accession": "IGVFDS0629YEMD",
2776            "aliases": [
2777                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input_AmpliconSequencing"
2778            ],
2779            "file_set_type": "experimental data",
2780            "status": "released"
2781        },
2782        {
2783            "@id": "/measurement-sets/IGVFDS4715UUNW/",
2784            "accession": "IGVFDS4715UUNW",
2785            "aliases": [
2786                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinB_AmpliconSequencing"
2787            ],
2788            "file_set_type": "experimental data",
2789            "status": "released"
2790        },
2791        {
2792            "@id": "/measurement-sets/IGVFDS5699JBLV/",
2793            "accession": "IGVFDS5699JBLV",
2794            "aliases": [
2795                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinC_AmpliconSequencing"
2796            ],
2797            "file_set_type": "experimental data",
2798            "status": "released"
2799        },
2800        {
2801            "@id": "/measurement-sets/IGVFDS3532HUSQ/",
2802            "accession": "IGVFDS3532HUSQ",
2803            "aliases": [
2804                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinD_AmpliconSequencing"
2805            ],
2806            "file_set_type": "experimental data",
2807            "status": "released"
2808        }
2809    ],
2810    "input_for": [],
2811    "lab": {
2812        "@id": "/labs/jesse-engreitz/",
2813        "title": "Jesse Engreitz, Stanford"
2814    },
2815    "notes": "This object's file_set_type was primary analysis and has been updated to be principal analysis.",
2816    "protocols": [
2817        "https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1"
2818    ],
2819    "release_timestamp": "2023-12-20T23:11:32.965271+00:00",
2820    "sample_summary": "Homo sapiens THP-1 cell line, modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library, sorted on expression of PPIF",
2821    "samples": [
2822        {
2823            "@id": "/in-vitro-systems/IGVFSM9197BHPY/",
2824            "@type": [
2825                "InVitroSystem",
2826                "Biosample",
2827                "Sample",
2828                "Item"
2829            ],
2830            "accession": "IGVFSM9197BHPY",
2831            "aliases": [
2832                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinD"
2833            ],
2834            "classifications": [
2835                "cell line"
2836            ],
2837            "institutional_certificates": [],
2838            "modifications": [
2839                {
2840                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2841                    "modality": "prime editing",
2842                    "status": "released"
2843                }
2844            ],
2845            "sample_terms": [
2846                {
2847                    "@id": "/sample-terms/EFO_0001253/",
2848                    "@type": [
2849                        "SampleTerm",
2850                        "OntologyTerm",
2851                        "Item"
2852                    ],
2853                    "aliases": [
2854                        "igvf:THP-1"
2855                    ],
2856                    "status": "released",
2857                    "summary": "THP-1",
2858                    "term_name": "THP-1"
2859                }
2860            ],
2861            "status": "released",
2862            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2863            "taxa": "Homo sapiens"
2864        },
2865        {
2866            "@id": "/in-vitro-systems/IGVFSM5150FUTV/",
2867            "@type": [
2868                "InVitroSystem",
2869                "Biosample",
2870                "Sample",
2871                "Item"
2872            ],
2873            "accession": "IGVFSM5150FUTV",
2874            "aliases": [
2875                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-FACS_Input"
2876            ],
2877            "classifications": [
2878                "cell line"
2879            ],
2880            "institutional_certificates": [],
2881            "modifications": [
2882                {
2883                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2884                    "modality": "prime editing",
2885                    "status": "released"
2886                }
2887            ],
2888            "sample_terms": [
2889                {
2890                    "@id": "/sample-terms/EFO_0001253/",
2891                    "@type": [
2892                        "SampleTerm",
2893                        "OntologyTerm",
2894                        "Item"
2895                    ],
2896                    "aliases": [
2897                        "igvf:THP-1"
2898                    ],
2899                    "status": "released",
2900                    "summary": "THP-1",
2901                    "term_name": "THP-1"
2902                }
2903            ],
2904            "status": "released",
2905            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2906            "taxa": "Homo sapiens"
2907        },
2908        {
2909            "@id": "/in-vitro-systems/IGVFSM9876ONTE/",
2910            "@type": [
2911                "InVitroSystem",
2912                "Biosample",
2913                "Sample",
2914                "Item"
2915            ],
2916            "accession": "IGVFSM9876ONTE",
2917            "aliases": [
2918                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-FACS_Input"
2919            ],
2920            "classifications": [
2921                "cell line"
2922            ],
2923            "institutional_certificates": [],
2924            "modifications": [
2925                {
2926                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2927                    "modality": "prime editing",
2928                    "status": "released"
2929                }
2930            ],
2931            "sample_terms": [
2932                {
2933                    "@id": "/sample-terms/EFO_0001253/",
2934                    "@type": [
2935                        "SampleTerm",
2936                        "OntologyTerm",
2937                        "Item"
2938                    ],
2939                    "aliases": [
2940                        "igvf:THP-1"
2941                    ],
2942                    "status": "released",
2943                    "summary": "THP-1",
2944                    "term_name": "THP-1"
2945                }
2946            ],
2947            "status": "released",
2948            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2949            "taxa": "Homo sapiens"
2950        },
2951        {
2952            "@id": "/in-vitro-systems/IGVFSM2408BZVR/",
2953            "@type": [
2954                "InVitroSystem",
2955                "Biosample",
2956                "Sample",
2957                "Item"
2958            ],
2959            "accession": "IGVFSM2408BZVR",
2960            "aliases": [
2961                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-BinC"
2962            ],
2963            "classifications": [
2964                "cell line"
2965            ],
2966            "institutional_certificates": [],
2967            "modifications": [
2968                {
2969                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
2970                    "modality": "prime editing",
2971                    "status": "released"
2972                }
2973            ],
2974            "sample_terms": [
2975                {
2976                    "@id": "/sample-terms/EFO_0001253/",
2977                    "@type": [
2978                        "SampleTerm",
2979                        "OntologyTerm",
2980                        "Item"
2981                    ],
2982                    "aliases": [
2983                        "igvf:THP-1"
2984                    ],
2985                    "status": "released",
2986                    "summary": "THP-1",
2987                    "term_name": "THP-1"
2988                }
2989            ],
2990            "status": "released",
2991            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
2992            "taxa": "Homo sapiens"
2993        },
2994        {
2995            "@id": "/in-vitro-systems/IGVFSM6463YBYJ/",
2996            "@type": [
2997                "InVitroSystem",
2998                "Biosample",
2999                "Sample",
3000                "Item"
3001            ],
3002            "accession": "IGVFSM6463YBYJ",
3003            "aliases": [
3004                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinC"
3005            ],
3006            "classifications": [
3007                "cell line"
3008            ],
3009            "institutional_certificates": [],
3010            "modifications": [
3011                {
3012                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3013                    "modality": "prime editing",
3014                    "status": "released"
3015                }
3016            ],
3017            "sample_terms": [
3018                {
3019                    "@id": "/sample-terms/EFO_0001253/",
3020                    "@type": [
3021                        "SampleTerm",
3022                        "OntologyTerm",
3023                        "Item"
3024                    ],
3025                    "aliases": [
3026                        "igvf:THP-1"
3027                    ],
3028                    "status": "released",
3029                    "summary": "THP-1",
3030                    "term_name": "THP-1"
3031                }
3032            ],
3033            "status": "released",
3034            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3035            "taxa": "Homo sapiens"
3036        },
3037        {
3038            "@id": "/in-vitro-systems/IGVFSM5627EEDY/",
3039            "@type": [
3040                "InVitroSystem",
3041                "Biosample",
3042                "Sample",
3043                "Item"
3044            ],
3045            "accession": "IGVFSM5627EEDY",
3046            "aliases": [
3047                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-BinA"
3048            ],
3049            "classifications": [
3050                "cell line"
3051            ],
3052            "institutional_certificates": [],
3053            "modifications": [
3054                {
3055                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3056                    "modality": "prime editing",
3057                    "status": "released"
3058                }
3059            ],
3060            "sample_terms": [
3061                {
3062                    "@id": "/sample-terms/EFO_0001253/",
3063                    "@type": [
3064                        "SampleTerm",
3065                        "OntologyTerm",
3066                        "Item"
3067                    ],
3068                    "aliases": [
3069                        "igvf:THP-1"
3070                    ],
3071                    "status": "released",
3072                    "summary": "THP-1",
3073                    "term_name": "THP-1"
3074                }
3075            ],
3076            "status": "released",
3077            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3078            "taxa": "Homo sapiens"
3079        },
3080        {
3081            "@id": "/in-vitro-systems/IGVFSM5175SJIS/",
3082            "@type": [
3083                "InVitroSystem",
3084                "Biosample",
3085                "Sample",
3086                "Item"
3087            ],
3088            "accession": "IGVFSM5175SJIS",
3089            "aliases": [
3090                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinB"
3091            ],
3092            "classifications": [
3093                "cell line"
3094            ],
3095            "institutional_certificates": [],
3096            "modifications": [
3097                {
3098                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3099                    "modality": "prime editing",
3100                    "status": "released"
3101                }
3102            ],
3103            "sample_terms": [
3104                {
3105                    "@id": "/sample-terms/EFO_0001253/",
3106                    "@type": [
3107                        "SampleTerm",
3108                        "OntologyTerm",
3109                        "Item"
3110                    ],
3111                    "aliases": [
3112                        "igvf:THP-1"
3113                    ],
3114                    "status": "released",
3115                    "summary": "THP-1",
3116                    "term_name": "THP-1"
3117                }
3118            ],
3119            "status": "released",
3120            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3121            "taxa": "Homo sapiens"
3122        },
3123        {
3124            "@id": "/in-vitro-systems/IGVFSM5332OJBP/",
3125            "@type": [
3126                "InVitroSystem",
3127                "Biosample",
3128                "Sample",
3129                "Item"
3130            ],
3131            "accession": "IGVFSM5332OJBP",
3132            "aliases": [
3133                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinA"
3134            ],
3135            "classifications": [
3136                "cell line"
3137            ],
3138            "institutional_certificates": [],
3139            "modifications": [
3140                {
3141                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3142                    "modality": "prime editing",
3143                    "status": "released"
3144                }
3145            ],
3146            "sample_terms": [
3147                {
3148                    "@id": "/sample-terms/EFO_0001253/",
3149                    "@type": [
3150                        "SampleTerm",
3151                        "OntologyTerm",
3152                        "Item"
3153                    ],
3154                    "aliases": [
3155                        "igvf:THP-1"
3156                    ],
3157                    "status": "released",
3158                    "summary": "THP-1",
3159                    "term_name": "THP-1"
3160                }
3161            ],
3162            "status": "released",
3163            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3164            "taxa": "Homo sapiens"
3165        },
3166        {
3167            "@id": "/in-vitro-systems/IGVFSM9365FWZA/",
3168            "@type": [
3169                "InVitroSystem",
3170                "Biosample",
3171                "Sample",
3172                "Item"
3173            ],
3174            "accession": "IGVFSM9365FWZA",
3175            "aliases": [
3176                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-FACS_Input"
3177            ],
3178            "classifications": [
3179                "cell line"
3180            ],
3181            "institutional_certificates": [],
3182            "modifications": [
3183                {
3184                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3185                    "modality": "prime editing",
3186                    "status": "released"
3187                }
3188            ],
3189            "sample_terms": [
3190                {
3191                    "@id": "/sample-terms/EFO_0001253/",
3192                    "@type": [
3193                        "SampleTerm",
3194                        "OntologyTerm",
3195                        "Item"
3196                    ],
3197                    "aliases": [
3198                        "igvf:THP-1"
3199                    ],
3200                    "status": "released",
3201                    "summary": "THP-1",
3202                    "term_name": "THP-1"
3203                }
3204            ],
3205            "status": "released",
3206            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3207            "taxa": "Homo sapiens"
3208        },
3209        {
3210            "@id": "/in-vitro-systems/IGVFSM4599PEWQ/",
3211            "@type": [
3212                "InVitroSystem",
3213                "Biosample",
3214                "Sample",
3215                "Item"
3216            ],
3217            "accession": "IGVFSM4599PEWQ",
3218            "aliases": [
3219                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinA"
3220            ],
3221            "classifications": [
3222                "cell line"
3223            ],
3224            "institutional_certificates": [],
3225            "modifications": [
3226                {
3227                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3228                    "modality": "prime editing",
3229                    "status": "released"
3230                }
3231            ],
3232            "sample_terms": [
3233                {
3234                    "@id": "/sample-terms/EFO_0001253/",
3235                    "@type": [
3236                        "SampleTerm",
3237                        "OntologyTerm",
3238                        "Item"
3239                    ],
3240                    "aliases": [
3241                        "igvf:THP-1"
3242                    ],
3243                    "status": "released",
3244                    "summary": "THP-1",
3245                    "term_name": "THP-1"
3246                }
3247            ],
3248            "status": "released",
3249            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3250            "taxa": "Homo sapiens"
3251        },
3252        {
3253            "@id": "/in-vitro-systems/IGVFSM4073LMYD/",
3254            "@type": [
3255                "InVitroSystem",
3256                "Biosample",
3257                "Sample",
3258                "Item"
3259            ],
3260            "accession": "IGVFSM4073LMYD",
3261            "aliases": [
3262                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input"
3263            ],
3264            "classifications": [
3265                "cell line"
3266            ],
3267            "institutional_certificates": [],
3268            "modifications": [
3269                {
3270                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3271                    "modality": "prime editing",
3272                    "status": "released"
3273                }
3274            ],
3275            "sample_terms": [
3276                {
3277                    "@id": "/sample-terms/EFO_0001253/",
3278                    "@type": [
3279                        "SampleTerm",
3280                        "OntologyTerm",
3281                        "Item"
3282                    ],
3283                    "aliases": [
3284                        "igvf:THP-1"
3285                    ],
3286                    "status": "released",
3287                    "summary": "THP-1",
3288                    "term_name": "THP-1"
3289                }
3290            ],
3291            "status": "released",
3292            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3293            "taxa": "Homo sapiens"
3294        },
3295        {
3296            "@id": "/in-vitro-systems/IGVFSM4125CFFV/",
3297            "@type": [
3298                "InVitroSystem",
3299                "Biosample",
3300                "Sample",
3301                "Item"
3302            ],
3303            "accession": "IGVFSM4125CFFV",
3304            "aliases": [
3305                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-BinA"
3306            ],
3307            "classifications": [
3308                "cell line"
3309            ],
3310            "institutional_certificates": [],
3311            "modifications": [
3312                {
3313                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3314                    "modality": "prime editing",
3315                    "status": "released"
3316                }
3317            ],
3318            "sample_terms": [
3319                {
3320                    "@id": "/sample-terms/EFO_0001253/",
3321                    "@type": [
3322                        "SampleTerm",
3323                        "OntologyTerm",
3324                        "Item"
3325                    ],
3326                    "aliases": [
3327                        "igvf:THP-1"
3328                    ],
3329                    "status": "released",
3330                    "summary": "THP-1",
3331                    "term_name": "THP-1"
3332                }
3333            ],
3334            "status": "released",
3335            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3336            "taxa": "Homo sapiens"
3337        },
3338        {
3339            "@id": "/in-vitro-systems/IGVFSM5844KEUJ/",
3340            "@type": [
3341                "InVitroSystem",
3342                "Biosample",
3343                "Sample",
3344                "Item"
3345            ],
3346            "accession": "IGVFSM5844KEUJ",
3347            "aliases": [
3348                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinA"
3349            ],
3350            "classifications": [
3351                "cell line"
3352            ],
3353            "institutional_certificates": [],
3354            "modifications": [
3355                {
3356                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3357                    "modality": "prime editing",
3358                    "status": "released"
3359                }
3360            ],
3361            "sample_terms": [
3362                {
3363                    "@id": "/sample-terms/EFO_0001253/",
3364                    "@type": [
3365                        "SampleTerm",
3366                        "OntologyTerm",
3367                        "Item"
3368                    ],
3369                    "aliases": [
3370                        "igvf:THP-1"
3371                    ],
3372                    "status": "released",
3373                    "summary": "THP-1",
3374                    "term_name": "THP-1"
3375                }
3376            ],
3377            "status": "released",
3378            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3379            "taxa": "Homo sapiens"
3380        },
3381        {
3382            "@id": "/in-vitro-systems/IGVFSM0705YYHP/",
3383            "@type": [
3384                "InVitroSystem",
3385                "Biosample",
3386                "Sample",
3387                "Item"
3388            ],
3389            "accession": "IGVFSM0705YYHP",
3390            "aliases": [
3391                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinC"
3392            ],
3393            "classifications": [
3394                "cell line"
3395            ],
3396            "institutional_certificates": [],
3397            "modifications": [
3398                {
3399                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3400                    "modality": "prime editing",
3401                    "status": "released"
3402                }
3403            ],
3404            "sample_terms": [
3405                {
3406                    "@id": "/sample-terms/EFO_0001253/",
3407                    "@type": [
3408                        "SampleTerm",
3409                        "OntologyTerm",
3410                        "Item"
3411                    ],
3412                    "aliases": [
3413                        "igvf:THP-1"
3414                    ],
3415                    "status": "released",
3416                    "summary": "THP-1",
3417                    "term_name": "THP-1"
3418                }
3419            ],
3420            "status": "released",
3421            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3422            "taxa": "Homo sapiens"
3423        },
3424        {
3425            "@id": "/in-vitro-systems/IGVFSM4383GTZM/",
3426            "@type": [
3427                "InVitroSystem",
3428                "Biosample",
3429                "Sample",
3430                "Item"
3431            ],
3432            "accession": "IGVFSM4383GTZM",
3433            "aliases": [
3434                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinC"
3435            ],
3436            "classifications": [
3437                "cell line"
3438            ],
3439            "institutional_certificates": [],
3440            "modifications": [
3441                {
3442                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3443                    "modality": "prime editing",
3444                    "status": "released"
3445                }
3446            ],
3447            "sample_terms": [
3448                {
3449                    "@id": "/sample-terms/EFO_0001253/",
3450                    "@type": [
3451                        "SampleTerm",
3452                        "OntologyTerm",
3453                        "Item"
3454                    ],
3455                    "aliases": [
3456                        "igvf:THP-1"
3457                    ],
3458                    "status": "released",
3459                    "summary": "THP-1",
3460                    "term_name": "THP-1"
3461                }
3462            ],
3463            "status": "released",
3464            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3465            "taxa": "Homo sapiens"
3466        },
3467        {
3468            "@id": "/in-vitro-systems/IGVFSM4853BCZC/",
3469            "@type": [
3470                "InVitroSystem",
3471                "Biosample",
3472                "Sample",
3473                "Item"
3474            ],
3475            "accession": "IGVFSM4853BCZC",
3476            "aliases": [
3477                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinC"
3478            ],
3479            "classifications": [
3480                "cell line"
3481            ],
3482            "institutional_certificates": [],
3483            "modifications": [
3484                {
3485                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3486                    "modality": "prime editing",
3487                    "status": "released"
3488                }
3489            ],
3490            "sample_terms": [
3491                {
3492                    "@id": "/sample-terms/EFO_0001253/",
3493                    "@type": [
3494                        "SampleTerm",
3495                        "OntologyTerm",
3496                        "Item"
3497                    ],
3498                    "aliases": [
3499                        "igvf:THP-1"
3500                    ],
3501                    "status": "released",
3502                    "summary": "THP-1",
3503                    "term_name": "THP-1"
3504                }
3505            ],
3506            "status": "released",
3507            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3508            "taxa": "Homo sapiens"
3509        },
3510        {
3511            "@id": "/in-vitro-systems/IGVFSM7075RRIN/",
3512            "@type": [
3513                "InVitroSystem",
3514                "Biosample",
3515                "Sample",
3516                "Item"
3517            ],
3518            "accession": "IGVFSM7075RRIN",
3519            "aliases": [
3520                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-THP1-PE2_Exp2_NegControl"
3521            ],
3522            "classifications": [
3523                "cell line"
3524            ],
3525            "institutional_certificates": [],
3526            "modifications": [
3527                {
3528                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3529                    "modality": "prime editing",
3530                    "status": "released"
3531                }
3532            ],
3533            "sample_terms": [
3534                {
3535                    "@id": "/sample-terms/EFO_0001253/",
3536                    "@type": [
3537                        "SampleTerm",
3538                        "OntologyTerm",
3539                        "Item"
3540                    ],
3541                    "aliases": [
3542                        "igvf:THP-1"
3543                    ],
3544                    "status": "released",
3545                    "summary": "THP-1",
3546                    "term_name": "THP-1"
3547                }
3548            ],
3549            "status": "released",
3550            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)",
3551            "taxa": "Homo sapiens"
3552        },
3553        {
3554            "@id": "/in-vitro-systems/IGVFSM4588UXMN/",
3555            "@type": [
3556                "InVitroSystem",
3557                "Biosample",
3558                "Sample",
3559                "Item"
3560            ],
3561            "accession": "IGVFSM4588UXMN",
3562            "aliases": [
3563                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-BinD"
3564            ],
3565            "classifications": [
3566                "cell line"
3567            ],
3568            "institutional_certificates": [],
3569            "modifications": [
3570                {
3571                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3572                    "modality": "prime editing",
3573                    "status": "released"
3574                }
3575            ],
3576            "sample_terms": [
3577                {
3578                    "@id": "/sample-terms/EFO_0001253/",
3579                    "@type": [
3580                        "SampleTerm",
3581                        "OntologyTerm",
3582                        "Item"
3583                    ],
3584                    "aliases": [
3585                        "igvf:THP-1"
3586                    ],
3587                    "status": "released",
3588                    "summary": "THP-1",
3589                    "term_name": "THP-1"
3590                }
3591            ],
3592            "status": "released",
3593            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3594            "taxa": "Homo sapiens"
3595        },
3596        {
3597            "@id": "/in-vitro-systems/IGVFSM0996COAP/",
3598            "@type": [
3599                "InVitroSystem",
3600                "Biosample",
3601                "Sample",
3602                "Item"
3603            ],
3604            "accession": "IGVFSM0996COAP",
3605            "aliases": [
3606                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinD"
3607            ],
3608            "classifications": [
3609                "cell line"
3610            ],
3611            "institutional_certificates": [],
3612            "modifications": [
3613                {
3614                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3615                    "modality": "prime editing",
3616                    "status": "released"
3617                }
3618            ],
3619            "sample_terms": [
3620                {
3621                    "@id": "/sample-terms/EFO_0001253/",
3622                    "@type": [
3623                        "SampleTerm",
3624                        "OntologyTerm",
3625                        "Item"
3626                    ],
3627                    "aliases": [
3628                        "igvf:THP-1"
3629                    ],
3630                    "status": "released",
3631                    "summary": "THP-1",
3632                    "term_name": "THP-1"
3633                }
3634            ],
3635            "status": "released",
3636            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3637            "taxa": "Homo sapiens"
3638        },
3639        {
3640            "@id": "/in-vitro-systems/IGVFSM9715TWHE/",
3641            "@type": [
3642                "InVitroSystem",
3643                "Biosample",
3644                "Sample",
3645                "Item"
3646            ],
3647            "accession": "IGVFSM9715TWHE",
3648            "aliases": [
3649                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-BinD"
3650            ],
3651            "classifications": [
3652                "cell line"
3653            ],
3654            "institutional_certificates": [],
3655            "modifications": [
3656                {
3657                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3658                    "modality": "prime editing",
3659                    "status": "released"
3660                }
3661            ],
3662            "sample_terms": [
3663                {
3664                    "@id": "/sample-terms/EFO_0001253/",
3665                    "@type": [
3666                        "SampleTerm",
3667                        "OntologyTerm",
3668                        "Item"
3669                    ],
3670                    "aliases": [
3671                        "igvf:THP-1"
3672                    ],
3673                    "status": "released",
3674                    "summary": "THP-1",
3675                    "term_name": "THP-1"
3676                }
3677            ],
3678            "status": "released",
3679            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3680            "taxa": "Homo sapiens"
3681        },
3682        {
3683            "@id": "/in-vitro-systems/IGVFSM0805ZKDV/",
3684            "@type": [
3685                "InVitroSystem",
3686                "Biosample",
3687                "Sample",
3688                "Item"
3689            ],
3690            "accession": "IGVFSM0805ZKDV",
3691            "aliases": [
3692                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinC"
3693            ],
3694            "classifications": [
3695                "cell line"
3696            ],
3697            "institutional_certificates": [],
3698            "modifications": [
3699                {
3700                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3701                    "modality": "prime editing",
3702                    "status": "released"
3703                }
3704            ],
3705            "sample_terms": [
3706                {
3707                    "@id": "/sample-terms/EFO_0001253/",
3708                    "@type": [
3709                        "SampleTerm",
3710                        "OntologyTerm",
3711                        "Item"
3712                    ],
3713                    "aliases": [
3714                        "igvf:THP-1"
3715                    ],
3716                    "status": "released",
3717                    "summary": "THP-1",
3718                    "term_name": "THP-1"
3719                }
3720            ],
3721            "status": "released",
3722            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3723            "taxa": "Homo sapiens"
3724        },
3725        {
3726            "@id": "/in-vitro-systems/IGVFSM1854TJZA/",
3727            "@type": [
3728                "InVitroSystem",
3729                "Biosample",
3730                "Sample",
3731                "Item"
3732            ],
3733            "accession": "IGVFSM1854TJZA",
3734            "aliases": [
3735                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinA"
3736            ],
3737            "classifications": [
3738                "cell line"
3739            ],
3740            "institutional_certificates": [],
3741            "modifications": [
3742                {
3743                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3744                    "modality": "prime editing",
3745                    "status": "released"
3746                }
3747            ],
3748            "sample_terms": [
3749                {
3750                    "@id": "/sample-terms/EFO_0001253/",
3751                    "@type": [
3752                        "SampleTerm",
3753                        "OntologyTerm",
3754                        "Item"
3755                    ],
3756                    "aliases": [
3757                        "igvf:THP-1"
3758                    ],
3759                    "status": "released",
3760                    "summary": "THP-1",
3761                    "term_name": "THP-1"
3762                }
3763            ],
3764            "status": "released",
3765            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3766            "taxa": "Homo sapiens"
3767        },
3768        {
3769            "@id": "/in-vitro-systems/IGVFSM5940EPFP/",
3770            "@type": [
3771                "InVitroSystem",
3772                "Biosample",
3773                "Sample",
3774                "Item"
3775            ],
3776            "accession": "IGVFSM5940EPFP",
3777            "aliases": [
3778                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-FACS_Input"
3779            ],
3780            "classifications": [
3781                "cell line"
3782            ],
3783            "institutional_certificates": [],
3784            "modifications": [
3785                {
3786                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3787                    "modality": "prime editing",
3788                    "status": "released"
3789                }
3790            ],
3791            "sample_terms": [
3792                {
3793                    "@id": "/sample-terms/EFO_0001253/",
3794                    "@type": [
3795                        "SampleTerm",
3796                        "OntologyTerm",
3797                        "Item"
3798                    ],
3799                    "aliases": [
3800                        "igvf:THP-1"
3801                    ],
3802                    "status": "released",
3803                    "summary": "THP-1",
3804                    "term_name": "THP-1"
3805                }
3806            ],
3807            "status": "released",
3808            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3809            "taxa": "Homo sapiens"
3810        },
3811        {
3812            "@id": "/in-vitro-systems/IGVFSM8031IIWI/",
3813            "@type": [
3814                "InVitroSystem",
3815                "Biosample",
3816                "Sample",
3817                "Item"
3818            ],
3819            "accession": "IGVFSM8031IIWI",
3820            "aliases": [
3821                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinB"
3822            ],
3823            "classifications": [
3824                "cell line"
3825            ],
3826            "institutional_certificates": [],
3827            "modifications": [
3828                {
3829                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3830                    "modality": "prime editing",
3831                    "status": "released"
3832                }
3833            ],
3834            "sample_terms": [
3835                {
3836                    "@id": "/sample-terms/EFO_0001253/",
3837                    "@type": [
3838                        "SampleTerm",
3839                        "OntologyTerm",
3840                        "Item"
3841                    ],
3842                    "aliases": [
3843                        "igvf:THP-1"
3844                    ],
3845                    "status": "released",
3846                    "summary": "THP-1",
3847                    "term_name": "THP-1"
3848                }
3849            ],
3850            "status": "released",
3851            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3852            "taxa": "Homo sapiens"
3853        },
3854        {
3855            "@id": "/in-vitro-systems/IGVFSM8306UJIK/",
3856            "@type": [
3857                "InVitroSystem",
3858                "Biosample",
3859                "Sample",
3860                "Item"
3861            ],
3862            "accession": "IGVFSM8306UJIK",
3863            "aliases": [
3864                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-BinC"
3865            ],
3866            "classifications": [
3867                "cell line"
3868            ],
3869            "institutional_certificates": [],
3870            "modifications": [
3871                {
3872                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3873                    "modality": "prime editing",
3874                    "status": "released"
3875                }
3876            ],
3877            "sample_terms": [
3878                {
3879                    "@id": "/sample-terms/EFO_0001253/",
3880                    "@type": [
3881                        "SampleTerm",
3882                        "OntologyTerm",
3883                        "Item"
3884                    ],
3885                    "aliases": [
3886                        "igvf:THP-1"
3887                    ],
3888                    "status": "released",
3889                    "summary": "THP-1",
3890                    "term_name": "THP-1"
3891                }
3892            ],
3893            "status": "released",
3894            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3895            "taxa": "Homo sapiens"
3896        },
3897        {
3898            "@id": "/in-vitro-systems/IGVFSM3818KKHR/",
3899            "@type": [
3900                "InVitroSystem",
3901                "Biosample",
3902                "Sample",
3903                "Item"
3904            ],
3905            "accession": "IGVFSM3818KKHR",
3906            "aliases": [
3907                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-FACS_Input"
3908            ],
3909            "classifications": [
3910                "cell line"
3911            ],
3912            "institutional_certificates": [],
3913            "modifications": [
3914                {
3915                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3916                    "modality": "prime editing",
3917                    "status": "released"
3918                }
3919            ],
3920            "sample_terms": [
3921                {
3922                    "@id": "/sample-terms/EFO_0001253/",
3923                    "@type": [
3924                        "SampleTerm",
3925                        "OntologyTerm",
3926                        "Item"
3927                    ],
3928                    "aliases": [
3929                        "igvf:THP-1"
3930                    ],
3931                    "status": "released",
3932                    "summary": "THP-1",
3933                    "term_name": "THP-1"
3934                }
3935            ],
3936            "status": "released",
3937            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3938            "taxa": "Homo sapiens"
3939        },
3940        {
3941            "@id": "/in-vitro-systems/IGVFSM6259GNEC/",
3942            "@type": [
3943                "InVitroSystem",
3944                "Biosample",
3945                "Sample",
3946                "Item"
3947            ],
3948            "accession": "IGVFSM6259GNEC",
3949            "aliases": [
3950                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinA"
3951            ],
3952            "classifications": [
3953                "cell line"
3954            ],
3955            "institutional_certificates": [],
3956            "modifications": [
3957                {
3958                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
3959                    "modality": "prime editing",
3960                    "status": "released"
3961                }
3962            ],
3963            "sample_terms": [
3964                {
3965                    "@id": "/sample-terms/EFO_0001253/",
3966                    "@type": [
3967                        "SampleTerm",
3968                        "OntologyTerm",
3969                        "Item"
3970                    ],
3971                    "aliases": [
3972                        "igvf:THP-1"
3973                    ],
3974                    "status": "released",
3975                    "summary": "THP-1",
3976                    "term_name": "THP-1"
3977                }
3978            ],
3979            "status": "released",
3980            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
3981            "taxa": "Homo sapiens"
3982        },
3983        {
3984            "@id": "/in-vitro-systems/IGVFSM3965ATNS/",
3985            "@type": [
3986                "InVitroSystem",
3987                "Biosample",
3988                "Sample",
3989                "Item"
3990            ],
3991            "accession": "IGVFSM3965ATNS",
3992            "aliases": [
3993                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinA"
3994            ],
3995            "classifications": [
3996                "cell line"
3997            ],
3998            "institutional_certificates": [],
3999            "modifications": [
4000                {
4001                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4002                    "modality": "prime editing",
4003                    "status": "released"
4004                }
4005            ],
4006            "sample_terms": [
4007                {
4008                    "@id": "/sample-terms/EFO_0001253/",
4009                    "@type": [
4010                        "SampleTerm",
4011                        "OntologyTerm",
4012                        "Item"
4013                    ],
4014                    "aliases": [
4015                        "igvf:THP-1"
4016                    ],
4017                    "status": "released",
4018                    "summary": "THP-1",
4019                    "term_name": "THP-1"
4020                }
4021            ],
4022            "status": "released",
4023            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4024            "taxa": "Homo sapiens"
4025        },
4026        {
4027            "@id": "/in-vitro-systems/IGVFSM8901HJRO/",
4028            "@type": [
4029                "InVitroSystem",
4030                "Biosample",
4031                "Sample",
4032                "Item"
4033            ],
4034            "accession": "IGVFSM8901HJRO",
4035            "aliases": [
4036                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinB"
4037            ],
4038            "classifications": [
4039                "cell line"
4040            ],
4041            "institutional_certificates": [],
4042            "modifications": [
4043                {
4044                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4045                    "modality": "prime editing",
4046                    "status": "released"
4047                }
4048            ],
4049            "sample_terms": [
4050                {
4051                    "@id": "/sample-terms/EFO_0001253/",
4052                    "@type": [
4053                        "SampleTerm",
4054                        "OntologyTerm",
4055                        "Item"
4056                    ],
4057                    "aliases": [
4058                        "igvf:THP-1"
4059                    ],
4060                    "status": "released",
4061                    "summary": "THP-1",
4062                    "term_name": "THP-1"
4063                }
4064            ],
4065            "status": "released",
4066            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4067            "taxa": "Homo sapiens"
4068        },
4069        {
4070            "@id": "/in-vitro-systems/IGVFSM7954ICIY/",
4071            "@type": [
4072                "InVitroSystem",
4073                "Biosample",
4074                "Sample",
4075                "Item"
4076            ],
4077            "accession": "IGVFSM7954ICIY",
4078            "aliases": [
4079                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-BinB"
4080            ],
4081            "classifications": [
4082                "cell line"
4083            ],
4084            "institutional_certificates": [],
4085            "modifications": [
4086                {
4087                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4088                    "modality": "prime editing",
4089                    "status": "released"
4090                }
4091            ],
4092            "sample_terms": [
4093                {
4094                    "@id": "/sample-terms/EFO_0001253/",
4095                    "@type": [
4096                        "SampleTerm",
4097                        "OntologyTerm",
4098                        "Item"
4099                    ],
4100                    "aliases": [
4101                        "igvf:THP-1"
4102                    ],
4103                    "status": "released",
4104                    "summary": "THP-1",
4105                    "term_name": "THP-1"
4106                }
4107            ],
4108            "status": "released",
4109            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4110            "taxa": "Homo sapiens"
4111        },
4112        {
4113            "@id": "/in-vitro-systems/IGVFSM6349GRPM/",
4114            "@type": [
4115                "InVitroSystem",
4116                "Biosample",
4117                "Sample",
4118                "Item"
4119            ],
4120            "accession": "IGVFSM6349GRPM",
4121            "aliases": [
4122                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinD"
4123            ],
4124            "classifications": [
4125                "cell line"
4126            ],
4127            "institutional_certificates": [],
4128            "modifications": [
4129                {
4130                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4131                    "modality": "prime editing",
4132                    "status": "released"
4133                }
4134            ],
4135            "sample_terms": [
4136                {
4137                    "@id": "/sample-terms/EFO_0001253/",
4138                    "@type": [
4139                        "SampleTerm",
4140                        "OntologyTerm",
4141                        "Item"
4142                    ],
4143                    "aliases": [
4144                        "igvf:THP-1"
4145                    ],
4146                    "status": "released",
4147                    "summary": "THP-1",
4148                    "term_name": "THP-1"
4149                }
4150            ],
4151            "status": "released",
4152            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4153            "taxa": "Homo sapiens"
4154        },
4155        {
4156            "@id": "/in-vitro-systems/IGVFSM6276DPKS/",
4157            "@type": [
4158                "InVitroSystem",
4159                "Biosample",
4160                "Sample",
4161                "Item"
4162            ],
4163            "accession": "IGVFSM6276DPKS",
4164            "aliases": [
4165                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input"
4166            ],
4167            "classifications": [
4168                "cell line"
4169            ],
4170            "institutional_certificates": [],
4171            "modifications": [
4172                {
4173                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4174                    "modality": "prime editing",
4175                    "status": "released"
4176                }
4177            ],
4178            "sample_terms": [
4179                {
4180                    "@id": "/sample-terms/EFO_0001253/",
4181                    "@type": [
4182                        "SampleTerm",
4183                        "OntologyTerm",
4184                        "Item"
4185                    ],
4186                    "aliases": [
4187                        "igvf:THP-1"
4188                    ],
4189                    "status": "released",
4190                    "summary": "THP-1",
4191                    "term_name": "THP-1"
4192                }
4193            ],
4194            "status": "released",
4195            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4196            "taxa": "Homo sapiens"
4197        },
4198        {
4199            "@id": "/in-vitro-systems/IGVFSM3394FCPH/",
4200            "@type": [
4201                "InVitroSystem",
4202                "Biosample",
4203                "Sample",
4204                "Item"
4205            ],
4206            "accession": "IGVFSM3394FCPH",
4207            "aliases": [
4208                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinD"
4209            ],
4210            "classifications": [
4211                "cell line"
4212            ],
4213            "institutional_certificates": [],
4214            "modifications": [
4215                {
4216                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4217                    "modality": "prime editing",
4218                    "status": "released"
4219                }
4220            ],
4221            "sample_terms": [
4222                {
4223                    "@id": "/sample-terms/EFO_0001253/",
4224                    "@type": [
4225                        "SampleTerm",
4226                        "OntologyTerm",
4227                        "Item"
4228                    ],
4229                    "aliases": [
4230                        "igvf:THP-1"
4231                    ],
4232                    "status": "released",
4233                    "summary": "THP-1",
4234                    "term_name": "THP-1"
4235                }
4236            ],
4237            "status": "released",
4238            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4239            "taxa": "Homo sapiens"
4240        },
4241        {
4242            "@id": "/in-vitro-systems/IGVFSM1276SAGC/",
4243            "@type": [
4244                "InVitroSystem",
4245                "Biosample",
4246                "Sample",
4247                "Item"
4248            ],
4249            "accession": "IGVFSM1276SAGC",
4250            "aliases": [
4251                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinD"
4252            ],
4253            "classifications": [
4254                "cell line"
4255            ],
4256            "institutional_certificates": [],
4257            "modifications": [
4258                {
4259                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4260                    "modality": "prime editing",
4261                    "status": "released"
4262                }
4263            ],
4264            "sample_terms": [
4265                {
4266                    "@id": "/sample-terms/EFO_0001253/",
4267                    "@type": [
4268                        "SampleTerm",
4269                        "OntologyTerm",
4270                        "Item"
4271                    ],
4272                    "aliases": [
4273                        "igvf:THP-1"
4274                    ],
4275                    "status": "released",
4276                    "summary": "THP-1",
4277                    "term_name": "THP-1"
4278                }
4279            ],
4280            "status": "released",
4281            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4282            "taxa": "Homo sapiens"
4283        },
4284        {
4285            "@id": "/in-vitro-systems/IGVFSM2674RBOA/",
4286            "@type": [
4287                "InVitroSystem",
4288                "Biosample",
4289                "Sample",
4290                "Item"
4291            ],
4292            "accession": "IGVFSM2674RBOA",
4293            "aliases": [
4294                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinD"
4295            ],
4296            "classifications": [
4297                "cell line"
4298            ],
4299            "institutional_certificates": [],
4300            "modifications": [
4301                {
4302                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4303                    "modality": "prime editing",
4304                    "status": "released"
4305                }
4306            ],
4307            "sample_terms": [
4308                {
4309                    "@id": "/sample-terms/EFO_0001253/",
4310                    "@type": [
4311                        "SampleTerm",
4312                        "OntologyTerm",
4313                        "Item"
4314                    ],
4315                    "aliases": [
4316                        "igvf:THP-1"
4317                    ],
4318                    "status": "released",
4319                    "summary": "THP-1",
4320                    "term_name": "THP-1"
4321                }
4322            ],
4323            "status": "released",
4324            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4325            "taxa": "Homo sapiens"
4326        },
4327        {
4328            "@id": "/in-vitro-systems/IGVFSM8427KPPU/",
4329            "@type": [
4330                "InVitroSystem",
4331                "Biosample",
4332                "Sample",
4333                "Item"
4334            ],
4335            "accession": "IGVFSM8427KPPU",
4336            "aliases": [
4337                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinC"
4338            ],
4339            "classifications": [
4340                "cell line"
4341            ],
4342            "institutional_certificates": [],
4343            "modifications": [
4344                {
4345                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4346                    "modality": "prime editing",
4347                    "status": "released"
4348                }
4349            ],
4350            "sample_terms": [
4351                {
4352                    "@id": "/sample-terms/EFO_0001253/",
4353                    "@type": [
4354                        "SampleTerm",
4355                        "OntologyTerm",
4356                        "Item"
4357                    ],
4358                    "aliases": [
4359                        "igvf:THP-1"
4360                    ],
4361                    "status": "released",
4362                    "summary": "THP-1",
4363                    "term_name": "THP-1"
4364                }
4365            ],
4366            "status": "released",
4367            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4368            "taxa": "Homo sapiens"
4369        },
4370        {
4371            "@id": "/in-vitro-systems/IGVFSM4195NXPO/",
4372            "@type": [
4373                "InVitroSystem",
4374                "Biosample",
4375                "Sample",
4376                "Item"
4377            ],
4378            "accession": "IGVFSM4195NXPO",
4379            "aliases": [
4380                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-FACS_Input"
4381            ],
4382            "classifications": [
4383                "cell line"
4384            ],
4385            "institutional_certificates": [],
4386            "modifications": [
4387                {
4388                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4389                    "modality": "prime editing",
4390                    "status": "released"
4391                }
4392            ],
4393            "sample_terms": [
4394                {
4395                    "@id": "/sample-terms/EFO_0001253/",
4396                    "@type": [
4397                        "SampleTerm",
4398                        "OntologyTerm",
4399                        "Item"
4400                    ],
4401                    "aliases": [
4402                        "igvf:THP-1"
4403                    ],
4404                    "status": "released",
4405                    "summary": "THP-1",
4406                    "term_name": "THP-1"
4407                }
4408            ],
4409            "status": "released",
4410            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4411            "taxa": "Homo sapiens"
4412        },
4413        {
4414            "@id": "/in-vitro-systems/IGVFSM6465SGTZ/",
4415            "@type": [
4416                "InVitroSystem",
4417                "Biosample",
4418                "Sample",
4419                "Item"
4420            ],
4421            "accession": "IGVFSM6465SGTZ",
4422            "aliases": [
4423                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinB"
4424            ],
4425            "classifications": [
4426                "cell line"
4427            ],
4428            "institutional_certificates": [],
4429            "modifications": [
4430                {
4431                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4432                    "modality": "prime editing",
4433                    "status": "released"
4434                }
4435            ],
4436            "sample_terms": [
4437                {
4438                    "@id": "/sample-terms/EFO_0001253/",
4439                    "@type": [
4440                        "SampleTerm",
4441                        "OntologyTerm",
4442                        "Item"
4443                    ],
4444                    "aliases": [
4445                        "igvf:THP-1"
4446                    ],
4447                    "status": "released",
4448                    "summary": "THP-1",
4449                    "term_name": "THP-1"
4450                }
4451            ],
4452            "status": "released",
4453            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4454            "taxa": "Homo sapiens"
4455        },
4456        {
4457            "@id": "/in-vitro-systems/IGVFSM3986RDKP/",
4458            "@type": [
4459                "InVitroSystem",
4460                "Biosample",
4461                "Sample",
4462                "Item"
4463            ],
4464            "accession": "IGVFSM3986RDKP",
4465            "aliases": [
4466                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinB"
4467            ],
4468            "classifications": [
4469                "cell line"
4470            ],
4471            "institutional_certificates": [],
4472            "modifications": [
4473                {
4474                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4475                    "modality": "prime editing",
4476                    "status": "released"
4477                }
4478            ],
4479            "sample_terms": [
4480                {
4481                    "@id": "/sample-terms/EFO_0001253/",
4482                    "@type": [
4483                        "SampleTerm",
4484                        "OntologyTerm",
4485                        "Item"
4486                    ],
4487                    "aliases": [
4488                        "igvf:THP-1"
4489                    ],
4490                    "status": "released",
4491                    "summary": "THP-1",
4492                    "term_name": "THP-1"
4493                }
4494            ],
4495            "status": "released",
4496            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4497            "taxa": "Homo sapiens"
4498        },
4499        {
4500            "@id": "/in-vitro-systems/IGVFSM0143XZGF/",
4501            "@type": [
4502                "InVitroSystem",
4503                "Biosample",
4504                "Sample",
4505                "Item"
4506            ],
4507            "accession": "IGVFSM0143XZGF",
4508            "aliases": [
4509                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-BinB"
4510            ],
4511            "classifications": [
4512                "cell line"
4513            ],
4514            "institutional_certificates": [],
4515            "modifications": [
4516                {
4517                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4518                    "modality": "prime editing",
4519                    "status": "released"
4520                }
4521            ],
4522            "sample_terms": [
4523                {
4524                    "@id": "/sample-terms/EFO_0001253/",
4525                    "@type": [
4526                        "SampleTerm",
4527                        "OntologyTerm",
4528                        "Item"
4529                    ],
4530                    "aliases": [
4531                        "igvf:THP-1"
4532                    ],
4533                    "status": "released",
4534                    "summary": "THP-1",
4535                    "term_name": "THP-1"
4536                }
4537            ],
4538            "status": "released",
4539            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4540            "taxa": "Homo sapiens"
4541        },
4542        {
4543            "@id": "/in-vitro-systems/IGVFSM9821NUGZ/",
4544            "@type": [
4545                "InVitroSystem",
4546                "Biosample",
4547                "Sample",
4548                "Item"
4549            ],
4550            "accession": "IGVFSM9821NUGZ",
4551            "aliases": [
4552                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinB"
4553            ],
4554            "classifications": [
4555                "cell line"
4556            ],
4557            "institutional_certificates": [],
4558            "modifications": [
4559                {
4560                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
4561                    "modality": "prime editing",
4562                    "status": "released"
4563                }
4564            ],
4565            "sample_terms": [
4566                {
4567                    "@id": "/sample-terms/EFO_0001253/",
4568                    "@type": [
4569                        "SampleTerm",
4570                        "OntologyTerm",
4571                        "Item"
4572                    ],
4573                    "aliases": [
4574                        "igvf:THP-1"
4575                    ],
4576                    "status": "released",
4577                    "summary": "THP-1",
4578                    "term_name": "THP-1"
4579                }
4580            ],
4581            "status": "released",
4582            "summary": "Homo sapiens (male) THP-1 cell line (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
4583            "taxa": "Homo sapiens"
4584        }
4585    ],
4586    "schema_version": "10",
4587    "status": "released",
4588    "submitted_by": {
4589        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
4590        "title": "Michael Montgomery"
4591    },
4592    "submitted_files_timestamp": "2024-09-14T02:29:22.563925+00:00",
4593    "submitter_comment": "Analysis of PPIF promoter 5-bp tiling mutagenesis edit effects on PPIF expression that were measured by Variant-FlowFISH in THP-1 cells.",
4594    "summary": "CRISPR prime editing Variant-EFFECTS targeting PPIF integrating a guide (sgRNA) library targeting sequence variants in a genomic locus with unsorted FACS input, untransfected controls",
4595    "uuid": "bcc90877-c6bd-46e8-b293-3114aa975297",
4596    "workflows": [
4597        {
4598            "@id": "/workflows/IGVFWF0099SJHI/",
4599            "accession": "IGVFWF0099SJHI",
4600            "name": "Variant-EFFECTS Pipeline",
4601            "status": "in progress",
4602            "uniform_pipeline": false
4603        }
4604    ]
4605}