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IGVFDS2656JJBV

released
Aliases
ali-mortazavi:founder_kidney_analysis
File Set Type
principal analysis
Summary
Parse SPLiT-seq
Description
8 cube founder strain analysis for kidney tissue
Samples
Mus musculus multiplexed sample of adrenal gland, gastrocnemius, kidney, cellular sub pool(s): 009_13A, 009_67A, 009_67B, 009_67C, 009_67D, 009_67E, 009_67F, 009_67G, 009_67H, 009_67I, 009_67J, 009_67K, 009_67L, 009_67M, 009_67N, 009_67O, 010_13A, 010_67A, 010_67B, 010_67C, 010_67D, 010_67E, 010_67F, 010_67G, 010_67H, 010_67I, 010_67J, 010_67K, 010_67L, 010_67M, 010_67N, 010_67O
Attribution
Ali Mortazavi, UCI

Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Workflow
Uniform Pipeline
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
62 GB
validated

File Association Graph

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File Set
File
AnalysisSet

Samples

32 items
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
MultiplexedSample
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
MultiplexedSample
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
MultiplexedSample
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
MultiplexedSample
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
MultiplexedSample
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
MultiplexedSample
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
MultiplexedSample
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples

Donors

71 items
Aliases
  • ali-mortazavi:018_B6J_10F
female
Mus musculus
  • ali-mortazavi:041_129S1J_10M
male
Mus musculus
  • ali-mortazavi:030_AJ_10F
female
Mus musculus
  • ali-mortazavi:052_NZOJ_10F
female
Mus musculus
  • ali-mortazavi:057_WSBJ_10M
male
Mus musculus
  • ali-mortazavi:080_PWKJ_10F
female
Mus musculus
  • ali-mortazavi:069_NODJ_10M
male
Mus musculus
  • ali-mortazavi:058_WSBJ_10F
female
Mus musculus
  • ali-mortazavi:035_AJ_10M
male
Mus musculus
  • ali-mortazavi:088_CASTJ_10F
female
Mus musculus

AnalysisSet Input File Sets

32 items
Parse SPLiT-seq
Parse SPLiT-seq
Parse SPLiT-seq
Parse SPLiT-seq
Parse SPLiT-seq
Parse SPLiT-seq
Parse SPLiT-seq
Parse SPLiT-seq
Parse SPLiT-seq
Parse SPLiT-seq

Documents

2 items
Page
Preview
UCI/Caltech IGVF tissue pipeline report for Kidney.pdf
quality control report
UCI/Caltech IGVF tissue pipeline report for Kidney.pdf
quality control report