IGVFDS0965BMDY

released
1{
2    "@context": "/terms/",
3    "@id": "/analysis-sets/IGVFDS0965BMDY/",
4    "@type": [
5        "AnalysisSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS0965BMDY",
10    "assay_titles": [],
11    "audit": {
12        "INTERNAL_ACTION": [
13            {
14                "category": "missing publication",
15                "detail": "Analysis set [IGVFDS0965BMDY](/analysis-sets/IGVFDS0965BMDY/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
16                "level": 30,
17                "level_name": "INTERNAL_ACTION",
18                "name": "audit_file_set_missing_publication",
19                "path": "/analysis-sets/IGVFDS0965BMDY/"
20            }
21        ]
22    },
23    "award": {
24        "@id": "/awards/HG011966/",
25        "component": "functional characterization",
26        "contact_pi": {
27            "@id": "/users/eb543cda-67b7-493c-84eb-187d0dac13ba/",
28            "title": "Jay Shendure"
29        },
30        "title": "Massively parallel characterization of variants and elements impacting transcriptional regulation in dynamic cellular systems"
31    },
32    "control_for": [],
33    "creation_timestamp": "2024-11-27T10:41:53.523580+00:00",
34    "documents": [
35        "/documents/b3578d4c-d9da-4a88-a78a-a794cd3f9003/",
36        "/documents/ae6fd47e-25dc-413d-9641-18a139a44e4f/"
37    ],
38    "file_set_type": "intermediate analysis",
39    "files": [
40        {
41            "@id": "/tabular-files/IGVFFI0922GLFQ/",
42            "accession": "IGVFFI0922GLFQ",
43            "assembly": "hg19",
44            "content_type": "barcode to element mapping",
45            "controlled_access": false,
46            "creation_timestamp": "2024-11-27T10:50:56.206713+00:00",
47            "file_format": "tsv",
48            "file_size": 26702192,
49            "href": "/tabular-files/IGVFFI0922GLFQ/@@download/IGVFFI0922GLFQ.tsv.gz",
50            "s3_uri": "s3://igvf-files/2024/11/27/e335fe0c-ee96-47c6-8d82-72c1478bfc36/IGVFFI0922GLFQ.tsv.gz",
51            "status": "released",
52            "submitted_file_name": "\"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/ASD_nadav/mprasnakeflow/results/assignment/assignment_barcodes.default.tsv.gz\"",
53            "upload_status": "validated"
54        }
55    ],
56    "functional_assay_mechanisms": [],
57    "input_file_sets": [
58        {
59            "@id": "/construct-library-sets/IGVFDS9668QVZD/",
60            "accession": "IGVFDS9668QVZD",
61            "file_set_type": "reporter library",
62            "status": "released"
63        },
64        {
65            "@id": "/curated-sets/IGVFDS9739IIFE/",
66            "accession": "IGVFDS9739IIFE",
67            "file_set_type": "elements",
68            "status": "released"
69        }
70    ],
71    "input_for": [
72        "/analysis-sets/IGVFDS2165KBMD/"
73    ],
74    "lab": {
75        "@id": "/labs/nadav-ahituv/",
76        "title": "Nadav Ahituv, UCSF"
77    },
78    "protocols": [],
79    "release_timestamp": "2025-01-09T20:34:28.141234+00:00",
80    "samples": [],
81    "schema_version": "9",
82    "status": "released",
83    "submitted_by": {
84        "@id": "/users/3ad3479d-753b-4293-9c09-c0dcabfd0ddb/",
85        "title": "Max Schubach"
86    },
87    "submitted_files_timestamp": "2024-11-27T10:50:56.206713+00:00",
88    "summary": "Unspecified assay: barcode to element mapping",
89    "uuid": "12e9e00e-5789-4b35-9509-a433e122a683",
90    "workflows": [
91        {
92            "@id": "/workflows/IGVFWF6032PEGT/",
93            "accession": "IGVFWF6032PEGT",
94            "name": "MPRAsnakeflow",
95            "status": "released",
96            "uniform_pipeline": true
97        }
98    ]
99}