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INDEXED
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AnalysisSet
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IGVFDS0577SVCR
IGVFDS0577SVCR
released
Json view
Aliases
guillaume-lettre:BP_KRAB_prolif_analysis_set
File Set Type
principal analysis
Summary
Proliferation CRISPR interference screen: guide quantifications
Workflows
MAGeCK CRISPR screen workflow (IGVFWF7224ABWD)
Samples
Homo sapiens TeloHAEC cell line, modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library
Protocols
https://www.protocols.io/view/crispri-screening-for-functional-characterization-5qpvo9ybxv4o/v1
Attribution
Guillaume Lettre, MHI
(
HG012010
—
Luca Pinello
)
Files
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2447ZTHV
csv
guide quantifications
guide quantifications
Guillaume Lettre, MHI
149 KB
validated
IGVFFI9153BTJA
csv
guide quantifications
guide quantifications
Guillaume Lettre, MHI
119 KB
validated
File Association Graph
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File Set
File
AnalysisSet
MeasurementSet
Samples
8 items
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM1983GROH
InVitroSystem
TeloHAEC
IGVFDS2633QETV
IGVFDS3175SLZT
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFSM2194MQPY
InVitroSystem
TeloHAEC
IGVFDS2633QETV
IGVFDS3175SLZT
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFSM2781WWEL
InVitroSystem
TeloHAEC
IGVFDS2633QETV
IGVFDS3175SLZT
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFSM5527CZJP
InVitroSystem
TeloHAEC
IGVFDS2633QETV
IGVFDS3175SLZT
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFSM6676TYOJ
InVitroSystem
TeloHAEC
IGVFDS2633QETV
IGVFDS3175SLZT
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFSM6947JXBN
InVitroSystem
TeloHAEC
IGVFDS2633QETV
IGVFDS3175SLZT
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFSM7723IFNO
InVitroSystem
TeloHAEC
IGVFDS2633QETV
IGVFDS3175SLZT
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFSM9748THRG
InVitroSystem
TeloHAEC
IGVFDS2633QETV
IGVFDS3175SLZT
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO3459DFTW
igvf:donor_of_teloHAEC
female
Homo sapiens
Associated Construct Library Sets
2 items
Accession
Summary
Library Design Files
IGVFDS2633QETV
guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFFI3496FQXK
IGVFFI0132XPDE
IGVFDS3175SLZT
guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFFI3496FQXK
IGVFFI0132XPDE
MeasurementSet Input File Sets
Show aliases columns
8 items
Measurement Sets
Measured Samples
IGVFDS4336EPZN
Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFSM5527CZJP
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFDS3415ZBJF
Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFSM6676TYOJ
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFDS3341DMCU
Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFSM2781WWEL
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFDS7222TNKJ
Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFSM6947JXBN
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFDS2744FHPX
Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFSM9748THRG
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFDS1869ECNZ
Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFSM1983GROH
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFDS3799RXYT
Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFSM7723IFNO
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
IGVFDS5385NQYL
Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure
IGVFSM2194MQPY
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library