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IGVFFI8724QZOH

released
validated
File Set
IGVFDS6753PKAH(single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq))
Summary
GRCm39 unfiltered alignments
Analysis Step Version
/analysis-step-versions/39c0498d-91f6-42de-8896-2fab1403f032/
File Format
bam
Content Type
alignments
Content Summary
unfiltered alignments
Aliases
buenrostro-bernstein:IGVFDS6753PKAH_bam
md5sum
809560ce126afb1c481c4192096c95e6
Content MD5sum
544f16ea0f72e26086d2be326c882407
File Size
18 GB
Submitted File Name
gs://fc-9649faf8-a4ec-4ca4-a975-498a1707d03c/submissions/1d455597-b132-452b-8b75-bf2db8c76d2e/single_cell_pipeline/d27d86fc-03ac-42f6-bfec-b20ab4d429df/call-atac/wf_atac/136b8c9c-de6b-4ca0-9be5-4abd61be8562/call-generate_bam/SS-PKR-436.bam
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

Alignment Details

Reference Files
Genome Assembly
GRCm39

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)

Files This File Derives From

15 items
yaml
seqspec
Jason Buenrostro, Broad
1.3 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.2 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.3 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.3 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.3 KB
validated
fastq
reads
Jason Buenrostro, Broad
6.0 GB
validated
fastq
reads
Jason Buenrostro, Broad
10 GB
validated
fastq
reads
Jason Buenrostro, Broad
10 GB
validated
fastq
reads
Jason Buenrostro, Broad
8.7 GB
validated
fastq
reads
Jason Buenrostro, Broad
6.9 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
bai
index
index of IGVFFI8724QZOH
Jason Buenrostro, Broad
4.9 MB
validated