IGVFFI8140ZBAO

released
validated
File Set
IGVFDS4582MPNU(RNA-seq integrating a control transduction expression vector library and an expression vector library of BATF3)
Summary
GRCh38 filtered transcriptome alignments
Analysis Step Version
File Format
bam
Content Type
transcriptome alignments
Content Summary
filtered transcriptome alignments
Aliases
charles-gersbach:cd8-tcells-rna-seq-chronic-activation-batf3-bam-rep3
md5sum
e96291a5851c54ff34af88b5e925c78d
Content MD5sum
4eb52d49b5783424ea49e12a2bd760bf
File Size
1.5 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/cd8-pSM65-IL-2-D3.star2.Aligned.out.sorted.bam
Checkfiles Version
Attribution

Alignment Details

Reference Files
Filtered
True
Genome Assembly
GRCh38

Samples

6 items
Sample Terms
Summary
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead for 14 days, transduced (lentivirus) with a expression vector library

Files This File Derives From

2 items
fastq
reads
Charles Gersbach, Duke
1.6 GB
validated
fastq
reads
Charles Gersbach, Duke
1.7 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
transcript quantifications
GRCh38 transcript quantifications
Charles Gersbach, Duke
505 KB
validated