IGVFFI6815BFHV

released

validated

File Set

IGVFDS5478QWPN(CRISPR activation FACS screen targeting IL2RA: alignments)

Summary

custom assembly unfiltered alignments

Analysis Step Version

/analysis-step-versions/f9f6ae88-d515-4e49-9902-deea3cf87703/

File Format

bam

Content Type

alignments

Content Summary

unfiltered alignments

Aliases

charles-gersbach:jurkats-alignment-crispra-vp64-il2ra-high-bin-rep1

md5sum

e2e00ddb7c797224646b781e79dcc448

Content MD5sum

46a7ac8a5c8125ed6c797236ada8faca

File Size

20 MB

Submitted File Name

/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/pSM44-High-R1_S8.sorted.bam

Alignment Details

Reference Files

IGVFFI5804OZJN

Samples

6 items

Sample Terms

Summary

IGVFSM1480DJBL

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL2RA ) modified with CRISPRa Sa-dCas9-VP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM2737ATVK

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 90-100% expression of IL2RA ) modified with CRISPRa Sa-dCas9-VP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM3148FRBY

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 90-100% expression of IL2RA ) modified with CRISPRa Sa-dCas9-VP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM3606VJWU

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL2RA ) modified with CRISPRa Sa-dCas9-VP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM4401YRWQ

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL2RA ) modified with CRISPRa Sa-dCas9-VP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM7748IVLZ

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 90-100% expression of IL2RA ) modified with CRISPRa Sa-dCas9-VP64, transduced (lentivirus) with a guide library (MOI of 0.4)