IGVFFI6752WOMF

released

validated

File Set

IGVFDS9065THHI(CRISPR interference FACS screen targeting CCR7: alignments)

Summary

custom assembly unfiltered alignments

Analysis Step Version

/analysis-step-versions/f9f6ae88-d515-4e49-9902-deea3cf87703/

File Format

bam

Content Type

alignments

Content Summary

unfiltered alignments

Aliases

charles-gersbach:cd8-tcells-alignment-crispri-ccr7-low-bin-rep1

md5sum

a773ac876a28101100db829bbb6df72c

Content MD5sum

74ea9703994a6bbc72f34c9a7a5fbe87

File Size

36 MB

Submitted File Name

/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/CCR7pos-pSM27-TF-L1_S1.sorted.bam

Alignment Details

Reference Files

IGVFFI6999YLZG

Samples

4 items

Sample Terms

Summary

IGVFSM1205VMNO

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 90-100% expression of CCR7) modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM2207SJEN

PrimaryCell

CD8-positive, alpha-beta memory T cell

IGVFSM7413JCSK

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 0-10% expression of CCR7) modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM9398LTWW

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 0-10% expression of CCR7) modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)