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IGVFFI4618HJLC

released
validated
File Set
IGVFDS2240UYEO(single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq))
Summary
GRCm39 unfiltered alignments
Analysis Step Version
/analysis-step-versions/39c0498d-91f6-42de-8896-2fab1403f032/
File Format
bam
Content Type
alignments
Content Summary
unfiltered alignments
Aliases
buenrostro-bernstein:IGVFDS2240UYEO_bam
md5sum
986363bc7b5ba2883c0e874febbd0e3e
Content MD5sum
3b3d536926dbf9e761b927aea2a512ff
File Size
23 GB
Submitted File Name
gs://fc-9649faf8-a4ec-4ca4-a975-498a1707d03c/submissions/1d455597-b132-452b-8b75-bf2db8c76d2e/single_cell_pipeline/053cebc3-3088-4281-87d1-65fca1fcb4ea/call-atac/wf_atac/eaafe4ff-d5c2-4579-abed-2218150ac698/call-generate_bam/SS-PKR-434.bam
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

Alignment Details

Reference Files
Genome Assembly
GRCm39

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files This File Derives From

15 items
yaml
seqspec
Jason Buenrostro, Broad
1.3 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.2 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.3 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.3 KB
validated
yaml
seqspec
Jason Buenrostro, Broad
1.3 KB
validated
fastq
reads
Jason Buenrostro, Broad
7.3 GB
validated
fastq
reads
Jason Buenrostro, Broad
11 GB
validated
fastq
reads
Jason Buenrostro, Broad
8.9 GB
validated
fastq
reads
Jason Buenrostro, Broad
7.3 GB
validated
fastq
reads
Jason Buenrostro, Broad
10 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
bai
index
index of IGVFFI4618HJLC
Jason Buenrostro, Broad
5.8 MB
validated