IGVFFI4212KOFH

released
validated
File Set
IGVFDS7046PDMA(RNA-seq: transcriptome alignments)
Summary
GRCh38 filtered transcriptome alignments
Analysis Step Version
File Format
bam
Content Type
transcriptome alignments
Content Summary
filtered transcriptome alignments
Aliases
charles-gersbach:alignment-set-bulk-rna-control-ipsc-cm-rep3
md5sum
8ac78f378008f6219a3cc646dc209c7e
Content MD5sum
4440199ee631be6d9017aca842b03be6
File Size
2.7 GB
Submitted File Name
/datacommons/gersbachlab/Ruhi/IGVFdatasubmission/TaylorHiCAR/RNA/control.3.rna.star2.Aligned.out.sorted.bam

Alignment Details

Reference Files
Filtered
True

Samples

6 items
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens treated with 4 μM GSK3 inhibition for 7 days
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens treated with 4 μM GSK3 inhibition for 7 days
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens treated with 4 μM GSK3 inhibition for 7 days

Files This File Derives From

2 items
fastq
reads
Charles Gersbach, Duke
3.2 GB
validated
fastq
reads
Charles Gersbach, Duke
3.0 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
transcript quantifications
GRCh38 transcript quantifications
Charles Gersbach, Duke
565 KB
validated

Attribution